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 Scott Harrison  Scott Harrison
 </P>  </P>
 <P>  <P>
 Last updated: 02/07/2001  Last updated: 02/12/2001
 </P>  </P>
 <P>  <P>
 This file describes issues associated with LON-CAPA  This file describes issues associated with LON-CAPA
 and a SQL database.  and a SQL database.
 </P>  </P>
 <H3>Latest HOWTO</H3>  <H2>Latest HOWTO</H2>
   <P>
   <UL>
   <LI>Current status of documentation</LI>
   <LI>Current status of implementation</LI>
   <LI>Purpose within LON-CAPA</LI>
   <LI>Installation</LI>
   <LI>Installation from source</LI>
   <LI>Configuration (automated)</LI>
   <LI>Manual configuration</LI>
   <LI>Testing</LI>
   <LI>Example sections of code relevant to LON-CAPA</LI>
   </UL>
   </P>
   <H2>Current status of documentation</H2>
 <P>  <P>
 I am going to begin documentation by inserting what notes  I am going to begin documentation by inserting what notes
 I have into this file.  I will be subsequently rearranging  I have into this file.  I will be subsequently rearranging
 them and editting them based on the tests that I conduct.  them and editing them based on the tests that I conduct.
 I am trying to make sure that documentation, installation,  I am trying to make sure that documentation, installation,
 and run-time issues are all consistent and correct.  The  and run-time issues are all consistent and correct.  The
 current status of everything is that it works and has  current status of everything is that it works and has
 been minimally tested, but things need to be cleaned up  been minimally tested, but things need to be cleaned up
 and checked again!  and checked again!
 </P>  </P>
 <H3>How to add a user to the SQL database</H3>  <H2>Current status of implementation</H2>
   <P>
   Need to
   <UL>
   <LI>Installation: Fix binary file listings for user permissions and ownership.
   <LI>Installation: Make sure sql server starts, and if database does not
   exist, then create. (/etc/rc.d).
   <LI>Processes: Make sure loncron initiates lonsql on library machines.
   <LI>Read in metadata from right place periodically.
   <LI>Implement tested perl module handler.
   </UL>
   <P>
   Right now, a lot of "feasibility" work has been done.
   Recipes for manual installation and configuration have
   been gathered.  Network connectivity of lond->lonsql->lond->lonc
   type tests have been performed.  A binary installation
   has been compiled in an RPM (LON-CAPA-mysql).
   The most lacking test in terms of feasibility has
   been looking at benchmarks to analyze the load at which
   the SQL database can efficiently allow many users to
   make simultaneous requests of the metadata database.
   </P>
   <P>
   Documentation has been pieced together over time.  But,
   as mentioned in the previous section, it needs an
   overhaul.
   </P>
   <P>
   The binary installation has some quirks associated with it.
   Some of the user permissions are wrong, although this is
   benign.  Also, other options of binary installation (such
   as using binary RPMs put together by others) were dismissed
   given the difficulty of getting differing combinations of
   these external RPMs to work together.
   </P>
   <P>
   Most configuration questions have been initially worked out
   to the point of getting this SQL software component working,
   however there may be more optimal approaches than currently
   exist.
   </P>
   <H2>Purpose within LON-CAPA</H2>
   <P>
   LON-CAPA is meant to distribute A LOT of educational content
   to A LOT of people.  It is ineffective to directly rely on contents
   within the ext2 filesystem to be speedily scanned for 
   on-the-fly searches of content descriptions.  (Simply put,
   it takes a cumbersome amount of time to open, read, analyze, and
   close thousands of files.)
   </P>
   <P>
   The solution is to hash-index various data fields that are
   descriptive of the educational resources on a LON-CAPA server
   machine.  Descriptive data fields are referred to as
   "metadata".  The question then arises as to how this metadata
   is handled in terms of the rest of the LON-CAPA network
   without burdening client and daemon processes.  I now
   answer this question in the format of Problem and Solution
   below.
   </P>
 <P>  <P>
 <PRE>  <PRE>
 start the mysql daemon as /usr/local/bin/safe_mysqld &  PROBLEM SITUATION:
 Login as root: mysql -u root -p mysql  
 enter the password as newmysql  
 add the user www: grant all priveleges on *.* to www@localhost identified by 'newmysql' with grant option;  
   
 INSERT INTO user (Host, User, Password)    If Server A wants data from Server B, Server A uses a lonc process to
 VALUES ('localhost','www',password('newmysql'));    send a database command to a Server B lond process.
       lonc= loncapa client process    A-lonc= a lonc process on Server A
       lond= loncapa daemon process
   
 GRANT ALL PRIVILEGES ON *.* TO www@localhost;                   database command
       A-lonc  --------TCP/IP----------------> B-lond
   
 FLUSH PRIVILEGES;    The problem emerges that A-lonc and B-lond are kept waiting for the
     MySQL server to "do its stuff", or in other words, perform the conceivably
     sophisticated, data-intensive, time-sucking database transaction.  By tying
     up a lonc and lond process, this significantly cripples the capabilities
     of LON-CAPA servers. 
   
 Here the user www has the right to grant privileges to other users.    While commercial databases have a variety of features that ATTEMPT to
 This can be changed if required with a simple update command on the grant tables    deal with this, freeware databases are still experimenting and exploring
     with different schemes with varying degrees of performance stability.
   
   THE SOLUTION:
   
     A separate daemon process was created that B-lond works with to
     handle database requests.  This daemon process is called "lonsql".
   
 /home/httpd/perl/perlsql/lonsql    So,
 /usr/local/mysql/fakeclient                  database command
     A-lonc  ---------TCP/IP-----------------> B-lond =====> B-lonsql
            <---------------------------------/                |
              "ok, I'll get back to you..."                    |
                                                               |
                                                               /
     A-lond  <-------------------------------  B-lonc   <======
              "Guess what? I have the result!"
   
     Of course, depending on success or failure, the messages may vary,
     but the principle remains the same where a separate pool of children
     processes (lonsql's) handle the MySQL database manipulations.
 </PRE>  </PRE>
 </P>  </P>
 <H3>To do</H3>  <H2>Installation</H2>
   <P>
   Installation of the LON-CAPA SQL database normally occurs
   by default when using the LON-CAPA installation CD
   (see http://install.lon-capa.org).  It is installed
   as the LON-CAPA-mysql RPM.  This RPM encodes for the MySQL
   engine and related perl interfaces (Perl::DBI, Perl::Msql-Mysql).
   </P>
   <P>
   The three components of a MySQL installation for the
   LON-CAPA system are further described immediately below.
   <TABLE BORDER="0">
   <TR><TD COLSPAN="2"><STRONG>Perl::DBI module</STRONG>-
   the API "front-end"...</TD></TR>
   <TR><TD WIDTH="10%"></TD><TD>database interface module for organizing generic
   database commands which are independent of specific
   database implementation (such as MySQL, mSQL, Postgres, etc).
   </TD></TR>
   <TR><TD COLSPAN="2"><STRONG>Perl::MySQL module</STRONG>-
   the API "mid-section"...</TD></TR>
   <TR><TD WIDTH="10%"></TD><TD>the module to directly interface with the actual
   MySQL database engine</TD></TR>
   <TR><TD COLSPAN="2"><STRONG>MySQL database engine</STRONG>-
   the "back-end"...</TD></TR>
   <TR><TD WIDTH="10%"></TD><TD>the binary installation (compiled either
   from source or pre-compiled file listings) which provides the
   actual MySQL functionality on the system</TD></TR>
   </TABLE>
   </P>
   <H2>Installation from source</H2>
   <P>
   The following set of tarballs was found to work together
   properly on a LON-CAPA RedHat 6.2 system:
   <UL>
   <LI>DBI-1.13.tar.gz
   <LI>Msql-Mysql-modules-1.2209.tar.gz
   <LI>mysql-3.22.32.tar.gz
   </UL>
   </P>
   <P>
   Installation was simply a matter of following the instructions
   and typing the several "make" commands for each 
   </P>
   <H2>Configuration (automated)</H2>
   <P>
   Not yet developed.  This will be part of an interface
   present on LON-CAPA systems that can be launched by
   entering the command <TT>/usr/sbin/loncapaconfig</TT>.
   </P>
   <H2>Manual configuration</H2>
 <P>  <P>
   This is not complete.
   </P>
   <P>
   <STRONG>Starting the mysql daemon</STRONG>: Login on the Linux
   system as user 'www'.  Enter the command
   <TT>/usr/local/bin/safe_mysqld &</TT>
   </P>
   <P>
   <STRONG>Set a password for 'root'</STRONG>:
   <TT>/usr/local/bin/mysqladmin -u root password 'new-password'</TT>
   </P>
   <P>
   <STRONG>Adding a user</STRONG>:  Start the mysql daemon.  Login to the
   mysql system as root (<TT>mysql -u root -p mysql</TT>)
   and enter the right password (for instance 'newmysql').  Add the user
   www
 <PRE>  <PRE>
 This is the output from scripts/mysql_install_db...  INSERT INTO user (Host, User, Password)
 still some todo things (like support-files/mysql.server)  VALUES ('localhost','www',password('newmysql'));
   
 Creating db table  
 Creating host table  
 Creating user table  
 Creating func table  
 Creating tables_priv table  
 Creating columns_priv table  
   
 To start mysqld at boot time you have to copy support-files/mysql.server  
 to the right place for your system  
   
 PLEASE REMEMBER TO SET A PASSWORD FOR THE MySQL root USER !  
 This is done with:  
 /usr/local/bin/mysqladmin -u root password 'new-password'  
 See the manual for more instructions.  
   
 Please report any problems with the /usr/local/bin/mysqlbug script!  
   
 The latest information about MySQL is available on the web at http://www.mysql.com  
 Support MySQL by buying support/licenses at http://www.tcx.se/license.htmy.  
 </PRE>  </PRE>
 </P>  </P>
 <H3>Source Installation and Manual Configuration</H3>  
 <P>  <P>
   <STRONG>Granting privileges to user 'www'</STRONG>:
   <PRE>
   GRANT ALL PRIVILEGES ON *.* TO www@localhost;
   FLUSH PRIVILEGES;
   </PRE>
   </P>
   <P>
   <STRONG>Set the SQL server to start upon system startup</STRONG>:
   Copy support-files/mysql.server to the right place on the system
   (/etc/rc.d/...).
   </P>
   <P>
   <STRONG>The Perl API</STRONG>
 <PRE>  <PRE>
 August, 29 2000; Scott Harrison; LON-CAPA  
   
 These are notes related to a Perl interface and MySQL server installation  
 on Redhat 6.1 and 6.2 boxes.  (Guy Albertelli and Harsha Jagasia  
 contributed significantly to this.)  
   
 ********************  
 * MySQL COMPONENTS *  
 ********************  
   
 There are three components to an effective MySQL installation for the  
 LON-CAPA system.  
   
 Perl::DBI module- the API "front-end"...  
                   database interface module for organizing generic  
                   database commands which are independent of specific  
                   database implementation (such as MySQL, mSQL, Postgres, etc).  
   
 Perl::MySQL module- the API "mid-section"...  
                     the module to directly interface with the actual  
                     MySQL database engine  
   
 MySQL database engine- the "back-end"...  
                        the binary installation (compiled either from source  
                        or pre-compiled file listings) which provides the  
                        actual MySQL functionality on the system  
   
 RedHat Installation-  
   
 Initially done from source:  
 DBI-1.13.tar.gz  Msql-Mysql-modules-1.2209.tar.gz  mysql-3.22.32.tar.gz  
   
 I am now using pre-compiled file listings.  
   
 There were problems with using the RedHat packages since the three  
 different RedHat packages were somewhat noncompatible with each other  
 in terms of expected file locations. (The Debian linux distribution,  
 on the other hand, has a working set of these packages).  
   
 Regardless of how we install these three components, there still remain  
 certain things which need to happen for the configuration.  
   
 *****************  
 * CONFIGURATION *  
 *****************  
   
 (Note: SOMEPASSWORD is actually set to another text string on the current  
 LON-CAPA systems.)  
   
 Configuration is needed to generate the necessary functionality for the  
 MySQL system with LON-CAPA.  
   
 The functionality needed can be understood from this example line  
 of perl code from "lonsql".  
   
    $dbh = DBI->connect( "DBI:mysql:loncapa",     $dbh = DBI->connect( "DBI:mysql:loncapa",
  "www",   "www",
  "SOMEPASSWORD",   "SOMEPASSWORD",
Line 195  FLUSH PRIVILEGES; Line 290  FLUSH PRIVILEGES;
 ** ABILITY for LON-CAPA machines to communicate with SQL databases on  ** ABILITY for LON-CAPA machines to communicate with SQL databases on
    other LON-CAPA machines     other LON-CAPA machines
   
 This is a little more intricate than might first be expected (and I probably  An up-to-date lond and lonsql.
 won't do a perfect job reciting everything in this short synopsis).  Because  </PRE>
 LON-CAPA machines will likely be handling many SQL requests at a time,  </P>
 there were some problems with current MySQL capabilities.  <H2>Testing</H2>
   <P>
 PROBLEM SITUATION:  <PRE>
   <STRONG>** TEST the database connection with my current tester.pl code
   If Server A wants data from Server B, Server A uses a lonc process to  which mimics what command will eventually be sent through lonc.</STRONG>
   send a database command to a Server B lond process.  
     lonc= loncapa client process    A-lonc= a lonc process on Server A  
     lond= loncapa daemon process  
   
                  database command  
     A-lonc  --------TCP/IP----------------> B-lond  
   
   The problem emerges that A-lonc and B-lond are kept waiting for the  
   MySQL server to "do its stuff", or in other words, perform the conceivably  
   sophisticated, data-intensive, time-sucking database transaction.  By tying  
   up a lonc and lond process, this significantly cripples the capabilities  
   of LON-CAPA servers.   
   
   While commercial databases have a variety of features that ATTEMPT to  
   deal with this, freeware databases are still experimenting and exploring  
   with different schemes with varying degrees of performance stability.  
   
 THE SOLUTION:  
   
   A separate daemon process was created that B-lond works with to  
   handle database requests.  This daemon process is called "lonsql".  
   
   So,  
                 database command  
   A-lonc  ---------TCP/IP-----------------> B-lond =====> B-lonsql  
          <---------------------------------/                |  
            "ok, I'll get back to you..."                    |  
                                                             |  
                                                             /  
   A-lond  <-------------------------------  B-lonc   <======  
            "Guess what? I have the result!"  
   
   Of course, depending on success or failure, the messages may vary,  
   but the principle remains the same where a separate pool of children  
   processes (lonsql's) handle the MySQL database manipulations.  
   
   $reply=reply(
       "querysend:SELECT * FROM general_information WHERE Id='AAAAA'",$lonID);
   </PRE>
   </P>
   <H2>Example sections of code relevant to LON-CAPA</H2>
   <P>
 Here are excerpts of code which implement the above handling:  Here are excerpts of code which implement the above handling:
   </P>
 **LONSQL  <P>
   <PRE>
   <STRONG>**LONSQL
 A subroutine from "lonsql" which establishes a child process for handling  A subroutine from "lonsql" which establishes a child process for handling
 database interactions.  database interactions.</STRONG>
   
 sub make_new_child {  sub make_new_child {
     my $pid;      my $pid;
Line 336  sub make_new_child { Line 403  sub make_new_child {
         exit;          exit;
     }      }
 }  }
   </P>
 ** LOND enabling of MySQL requestsw  <P>
   <STRONG>** LOND enabling of MySQL requests</STRONG>
   This code is part of every lond child process in the way that it parses command request syntax  <BR />
   sent to it from lonc processes.  querysend corresponds to B-lonc sending the result of the query.  This code is part of every lond child process in the
   queryreply corresponds to B-lond indicating that it has received the request and will start the  way that it parses command request syntax sent to it
   database transaction (it returns "ok" to A-lonc ($client)).  from lonc processes.  Based on the diagram above, querysend
   corresponds to B-lonc sending the result of the query.
   queryreply corresponds to B-lond indicating that it has
   received the request and will start the database transaction
   (it returns "ok" to
   A-lonc ($client)).
   <PRE>
 # ------------------------------------------------------------------- querysend  # ------------------------------------------------------------------- querysend
                    } elsif ($userinput =~ /^querysend/) {                     } elsif ($userinput =~ /^querysend/) {
                        my ($cmd,$query)=split(/:/,$userinput);                         my ($cmd,$query)=split(/:/,$userinput);
Line 363  sub make_new_child { Line 435  sub make_new_child {
    print $client "error:$!\n";     print $client "error:$!\n";
        }         }
   
   
   
 ** TEST the database connection with my current tester.pl code which mimics what command will eventually be  
    sent through lonc.  
   
 $reply=reply(  
     "querysend:SELECT * FROM general_information WHERE Id='AAAAA'",$lonID);  
 </PRE>  </PRE>
   
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