--- doc/loncapafiles/loncapafiles.lpml	2004/06/05 14:46:12	1.359
+++ doc/loncapafiles/loncapafiles.lpml	2004/09/23 15:35:57	1.391
@@ -2,7 +2,7 @@
  "http://lpml.sourceforge.net/DTD/lpml.dtd">
 <!-- loncapafiles.lpml -->
 
-<!-- $Id: loncapafiles.lpml,v 1.359 2004/06/05 14:46:12 www Exp $ -->
+<!-- $Id: loncapafiles.lpml,v 1.391 2004/09/23 15:35:57 sakharuk Exp $ -->
 
 <!--
 
@@ -624,6 +624,14 @@ roles.db) which specify the roles and pr
 LON-CAPA system.</description>
 </directory>
 <directory dist='default'>
+  <protectionlevel>never_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/lonCerts</targetdir>
+  <categoryname>server standard</categoryname>
+  <description>
+    Directory for Certificates for SSL and local auth modes
+  </description>
+</directory>
+<directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/html/adm/MathML</targetdir>
   <categoryname>server readonly</categoryname>
@@ -887,7 +895,9 @@ Thesaurus database file to be built from
 loncom/thesaurus/build_thesaurus_wrapper.sh
 </build>
 <dependencies>
-rawkey.txt
+rawkey.txt;
+build_thesaurus_db.pl;
+build_thesaurus_wrapper.sh
 </dependencies>
 </file>
 <file>
@@ -1126,6 +1136,7 @@ dialog.js;
 htmlarea.js;
 popupdiv.js;
 popupwin.js;
+license.txt
 </filenames>
 </fileglob>
 <file>
@@ -1417,6 +1428,14 @@ Descriptive list of abbreviations used i
 and privileges available in the network with function
 </description>
 </file>
+<file>
+<source>loncom/managers.tab</source>
+<target dist='default'>home/httpd/lonTabs/managers.tab</target>
+<categoryname>static conf</categoryname>
+<description>
+List of machines allowed to pass along updates to hosts.tab and domain.tab
+</description>
+</file>
 <file type="private">
 <source>loncom/hosts.tab</source>
 <target dist='default'>home/httpd/lonTabs/hosts.tab</target>
@@ -1506,6 +1525,14 @@ Batch script for removing temporary tabl
 </description>
 </file>
 <file>
+<source>loncom/metadata_database/parse_activity_log.pl</source>
+<target dist='default'>home/httpd/perl/parse_activity_log.pl</target>
+<categoryname>script</categoryname>
+<description>
+Batch script to copy activy logs from native format into the SQL metadata database.
+</description>
+</file>
+<file>
 <source>loncom/misc/cleanup_file_caches.pl</source>
 <target dist='default'>home/httpd/perl/cleanup_file_caches.pl</target>
 <categoryname>script</categoryname>
@@ -1524,6 +1551,15 @@ nohist_accesscount.db.
 </description>
 </file>
 <file>
+<source>loncom/debugging_tools/modify_config_files.pl</source>
+<target dist='default'>home/httpd/perl/modify_config_files.pl</target>
+<categoryname>script</categoryname>
+<description>
+Batch script to ensure certain LONCAPA configuration parameters for yum and
+MySQL are included in their configuration files.
+</description>
+</file>
+<file>
 <source>loncom/lonhttpd</source>
 <target dist='default'>home/httpd/perl/lonhttpd</target>
 <categoryname>script</categoryname>
@@ -1614,7 +1650,9 @@ echo 'pod2html lond'
 </dependencies>
 </file>
 <file>
-<source>loncom/build/CHECKRPMS</source>
+<source dist='default'>loncom/build/CHECKRPMS.default</source>
+<source dist='fedora1'>loncom/build/CHECKRPMS.fedora</source>
+<source dist='fedora2'>loncom/build/CHECKRPMS.fedora</source>
 <target dist='default'>home/httpd/cgi-bin/CHECKRPMS</target>
 <categoryname>script</categoryname>
 <description>CGI script that checks status of RPMs</description>
@@ -1672,6 +1710,42 @@ echo 'pod2html lonsql'
 </dependencies>
 </file>
 <file>
+  <source>loncom/CrGrant.pl</source>
+  <target dist='default'>home/httpd/perl/CrGrant.pl</target>
+  <categoryname>script</categoryname>
+  <description>
+    Script used to verify and grant an SSL certificate to a Lon-CAPA host
+  </description>
+  <status>in progress</status>
+</file>
+<file>
+  <source>loncom/CrGenerate.pl</source>
+  <target dist='default'>home/httpd/perl/CrGenerate.pl</target>
+  <categoryname>script</categoryname>
+  <description>
+    Script used to request an SSL certificate for a Lon-CAPA host.
+  </description>
+  <status>in progress</status>
+</file>
+<file>
+  <source>loncom/lonManage</source>
+  <target dist='default'>home/httpd/perl/lonManage</target>
+  <categoryname>script</categoryname>
+  <description>
+    Script to push changes to hosts.tab and domain.tab out to Lon-CAPA servers
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/apachereload</source>
+  <target dist='default'>home/httpd/perl/apachereload</target>
+  <categoryname>setuid script</categoryname>
+  <description>
+    Script to let www reload the webserver
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
 <source>loncom/lcpasswd</source>
 <target dist='default'>home/httpd/perl/lcpasswd</target>
 <categoryname>setuid script</categoryname>
@@ -1868,6 +1942,14 @@ Table which contains list of copyright p
 </description>
 </file>
 <file>
+<source>loncom/publisher/source_copyright.tab</source>
+<target dist='default'>home/httpd/html/res/adm/includes/source_copyright.tab</target>
+<categoryname>static conf</categoryname>
+<description>
+Table which contains list of source copyright possibilities for educational resources.
+</description>
+</file>
+<file>
 <source>loncom/publisher/language.tab</source>
 <target dist='default'>home/httpd/lonTabs/language.tab</target>
 <categoryname>static conf</categoryname>
@@ -2079,6 +2161,14 @@ Index file for the help system
 </description>
 </file>
 <file>
+<source>loncom/html/adm/help/nohelptopic.html</source>
+<target dist='default'>home/httpd/html/adm/help/nohelptopic.html</target>
+<categoryname>interface file</categoryname>
+<description>
+Page of links to help manuals - displayed when inline help is missing for a specific topic.
+</description>
+</file>
+<file>
 <source>doc/help/author.manual.access.tex</source>
 <target dist='default'>home/httpd/html/adm/help/tex/author.manual.access.tex
 </target>
@@ -2158,6 +2248,54 @@ The PDF Course Manual
 </description>
 <status>works/unverified</status>
 </file>
+<file>
+  <source>loncom/html/adm/help/ext_examples.html</source>
+  <target dist='default'>home/httpd/html/adm/help/ext_examples.html</target>
+  <categoryname>interface file</categoryname>
+  <description>
+    Examples for using &EXT in HTML
+  </description>
+</file>
+<file>
+  <source>loncom/html/adm/help/ext_examples.html.meta</source>
+  <target dist='default'>home/httpd/html/adm/help/ext_examples.html.meta</target>
+  <categoryname>interface file</categoryname>
+  <description>
+    Examples for using &EXT in HTML metadata
+  </description>
+</file>
+<file>
+  <source>loncom/html/adm/help/ext_examples.library</source>
+  <target dist='default'>home/httpd/html/adm/help/ext_examples.library</target>
+  <categoryname>interface file</categoryname>
+  <description>
+    Examples for using &EXT library
+  </description>
+</file>
+<file>
+  <source>loncom/html/adm/help/ext_examples.library.meta</source>
+  <target dist='default'>home/httpd/html/adm/help/ext_examples.library.meta</target>
+  <categoryname>interface file</categoryname>
+  <description>
+    Examples for using &EXT library metadata
+  </description>
+</file>
+<file>
+  <source>loncom/html/adm/help/ext_examples.problem</source>
+  <target dist='default'>home/httpd/html/adm/help/ext_examples.problem</target>
+  <categoryname>interface file</categoryname>
+  <description>
+    Examples for using &EXT problem
+  </description>
+</file>
+<file>
+  <source>loncom/html/adm/help/ext_examples.problem.meta</source>
+  <target dist='default'>home/httpd/html/adm/help/ext_examples.problem.meta</target>
+  <categoryname>interface file</categoryname>
+  <description>
+    Examples for using &EXT problem metadata
+  </description>
+</file>
 <fileglob>
 <glob>*.*</glob>
 <sourcedir>loncom/html/adm/help/gif/</sourcedir>
@@ -2168,6 +2306,19 @@ home/httpd/html/adm/help/gif/</targetdir
 Gif files for the help system
 </description>
 <filenames>
+Authoring_Dynamic_Plot_Axis_Labels.gif;
+Authoring_Dynamic_Plot_Axis_Tics_border.gif;
+Authoring_Dynamic_Plot_Axis_Tics_minor.gif;
+Authoring_Dynamic_Plot_Axis_Tics_nomirror.gif;
+Authoring_Dynamic_Plot_Axis_Tics_x_axis.gif;
+Authoring_Dynamic_Plot_Title_X_Y_Label.gif;
+Dynamic_Replication_Change.gif;
+Dynamic_Replication_Request.gif;
+Load_Balance_Example.gif;
+LONCAPA_Network_Diagram2.gif;
+LONCAPA_Network_Diagram.gif;
+Map_Example.gif;
+Resource_Assembly.gif;
 authorRemote.gif;
 constructionSpace.gif;
 constructionSpaceForPublishing.gif;
@@ -2220,6 +2371,19 @@ home/httpd/html/adm/help/eps/</targetdir
 EPS files for the help system
 </description>
 <filenames>
+Authoring_Dynamic_Plot_Axis_Labels.eps;
+Authoring_Dynamic_Plot_Axis_Tics_border.eps;
+Authoring_Dynamic_Plot_Axis_Tics_minor.eps;
+Authoring_Dynamic_Plot_Axis_Tics_nomirror.eps;
+Authoring_Dynamic_Plot_Axis_Tics_x_axis.eps;
+Authoring_Dynamic_Plot_Title_X_Y_Label.eps;
+Dynamic_Replication_Change.eps;
+Dynamic_Replication_Request.eps;
+Load_Balance_Example.eps;
+LONCAPA_Network_Diagram2.eps;
+LONCAPA_Network_Diagram.eps;
+Map_Example.eps;
+Resource_Assembly.eps;
 authorRemote.eps;
 constructionSpace.eps;
 constructionSpaceForPublishing.eps;
@@ -2278,6 +2442,8 @@ About_Communication.tex;
 About_Developers_Manual.tex;
 About_Numerical_and_Formula_Response.tex;
 all_functions_table.tex;
+adaptive_hints.tex;
+Additional_Help.tex;
 Ambiguous_Reference.tex;
 Analysis_Analyze_as.tex;
 Analysis_Analyze_Over.tex;
@@ -2333,6 +2499,7 @@ Cascading_Parameters.tex;
 Change_Colors.tex;
 Change_Password.tex;
 Chart_Description.tex;
+Change_Discussion_Display.tex;
 Chart_Output_Data.tex;
 Chart_Output_Formats.tex;
 Chatting.tex;
@@ -2388,16 +2555,28 @@ Docs_Adding_External_Resource.tex;
 Docs_Adding_Folders.tex;
 Docs_Adding_Syllabus.tex;
 Docs_Alternatives.tex;
+Docs_Check_Resource_Versions.tex;
 Docs_Creating_From_Template.tex;
+Docs_Dump_Course_Docs.tex;
 Docs_Editing_Templated_Pages.tex;
+Docs_Essay.tex;
 Docs_Importing_LON-CAPA_Resource.tex;
 Docs_Load_Map.tex;
 Docs_Main_Course_Documents.tex;
 Docs_Navigate_Content.tex;
+Docs_Option_Response.tex;
 Docs_Overview.tex;
+Docs_Radio.tex;
 Docs_Score_Upload_Form.tex;
+Docs_Search.tex;
+Docs_Simple_Problem.tex;
+Docs_String_Response.tex;
 Docs_Supplemental.tex;
 Docs_Uploading_From_Harddrive.tex;
+Docs_Verify_Content.tex;
+Edit_Syllabus.tex;
+exam_basics.tex;
+Exploring_Your_Course.tex;
 Finding_Resources.tex;
 Foils.tex;
 Formula_Response_Adv_Intro.tex;
@@ -2418,13 +2597,17 @@ Guts_Authoring.tex;
 Guts_Coding_Guidelines.tex;
 Guts_Course_Dir.tex;
 Guts_User_Dir.tex;
+Help.tex;
+Helper_Course_Initialization.tex;
 How_To_Edit_Existing_Content_Pages.tex;
 Latex_Footer.tex;
 Latex_Header.tex;
 Leaving_Feedback.tex;
 Login_To_LON-CAPA.tex;
 Metadata_Description.tex;
+Navigation_Screen.tex;
 Navmap_Host_Down.tex;
+NavMaps_MarkPosts_Read.tex;
 Numerical_Response_Advanced_Example.tex;
 Numerical_Response_Format.tex;
 Numerical_Response_Introduction.tex;
@@ -2436,6 +2619,7 @@ Numerical_Response_Randomization.tex;
 Numerical_Response_Simple_Example.tex;
 Numerical_Response_Tutorial_A.tex;
 Numerical_Response_Units.tex;
+numerical_wrong_answers.tex;
 Option_Response_Concept_Group_Example.tex;
 Option_Response_Matching_Example.tex;
 Option_Response_Problem_Creation.tex;
@@ -2447,8 +2631,11 @@ Other_Symbols.tex;
 Part_Tag_Edit_Help.tex;
 Personal_Info_Page.tex;
 Physical_Units.tex;
+Prefs_About_Me.tex;
 Prefs_Forwarding.tex;
+Prefs_Language.tex;
 Prefs_Screen_Name_Nickname.tex;
+Print_Options.tex;
 Print_Resource.tex;
 Problem_Editor_Testing_Area.tex;
 Problem_Editor_XML_Index.tex;
@@ -2464,13 +2651,18 @@ Radio_Response_Problems.tex;
 Radio_Response_Randomization.tex;
 Ranking_Problems.tex;
 Receipt.tex;
+Remote_Menu.tex;
 Resource_Discussion.tex;
 Resource_Types.tex;
 Roles_About.tex;
+Roles_Screen.tex;
 Script_Functions.tex;
 Scripting_Help.tex;
 Script_Tutorial_Intro.tex;
 Script_Variables.tex;
+Search_Advanced.tex;
+Search_Basic.tex;
+Searching.tex;
 Sending_Email.tex;
 Sequence_Advanced_Editor_Creation.tex;
 Sequence_Definition.tex;
@@ -2504,10 +2696,15 @@ Spreadsheet_Template_Row.tex;
 Spreadsheet_Ternary_Operator.tex;
 Spreadsheet_Tries.tex;
 Statistics_Overall_Key.tex;
+Statistics_Sequence.tex;
+Statistics_Cache.tex;
 String_Response_Problem_Creation.tex;
 String_Response_Problems.tex;
 Syllabus_ExtLink.tex;
 Syllabus_URLs.tex;
+TeXDropEmptyColumns_attribute.tex;
+TEXsize_attribute.tex;
+TEXwidth_attribute.tex;
 Tolerance.tex;
 Uploaded_Templates_PublicView.tex;
 Uploaded_Templates_TextBoxes.tex;
@@ -2535,6 +2732,7 @@ About_Communication.tex;
 About_Developers_Manual.tex;
 About_Numerical_and_Formula_Response.tex;
 CAPA_LON-CAPA_function_diffs.tex;
+Course_Maximum_Collaborators.tex;
 Course_Set_Start_End_Date.tex;
 Creating_A_Course_Intro.tex;
 Other_Symbols.tex;
@@ -2564,7 +2762,7 @@ Handler to show statistics on solving LO
 <file>
 <source>loncom/interface/statistics/lonstathelpers.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonstathelpers.pm</target>
-<categoryname>module</categoryname>
+<categoryname>handler</categoryname>
 <description>
 Utility module for statistics and data mining.
 </description>
@@ -2580,6 +2778,15 @@ The module that generate the html for th
 </description>
 </file>
 <file>
+<source>loncom/interface/statistics/lonsurveyreports.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonsurveyreports.pm
+</target>
+<categoryname>handler</categoryname>
+<description>
+Gives instructors access to compiled survey results.
+</description>
+</file>
+<file>
 <source>loncom/interface/statistics/lonstudentsubmissions.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonstudentsubmissions.pm
 </target>
@@ -2910,6 +3117,14 @@ Contains a set of functions that generat
 </description>
 </file>
 <file>
+<source>loncom/interface/lonspeller.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonspeller.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Contains a set of functions to use Aspell
+</description>
+</file>
+<file>
 <source>loncom/localize/lonlocal.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonlocal.pm</target>
 <categoryname>handler</categoryname>
@@ -3304,6 +3519,15 @@ role of student in a course, and add the
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/lonviewclasslist.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonviewclasslist.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Allows users (including students) to view the classlist of their course.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/interface/lonmsg.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonmsg.pm</target>
 <categoryname>handler</categoryname>
@@ -3478,11 +3702,20 @@ Has routines which control the remote co
 <target dist='default'>home/httpd/lib/perl/Apache/lonremote.pm</target>
 <categoryname>handler</categoryname>
 <description>
-Handler to lauch and collapse the remote control.
+Handler to launch and collapse the remote control.
 </description>
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/portfolio.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/portfolio.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Handler to manage user portfolios
+</description>
+<status>unverified</status>
+</file>
+<file>
 <source>rat/lonpageflip.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonpageflip.pm</target>
 <categoryname>handler</categoryname>
@@ -4080,6 +4313,15 @@ loncom/build/pod2html.sh ../auth/lonrole
 </dependencies>
 </file>
 <file>
+<source>loncom/interface/lonsource.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonsource.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Problem source code viewer
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/interface/lonindexer.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonindexer.pm</target>
 <categoryname>handler</categoryname>
@@ -4450,6 +4692,7 @@ accessbutton_pt.gif;
 accessbutton_de.gif;
 angry.gif;
 arrow_up.gif;
+baeh.gif;
 bigsmile.gif;
 branch.gif;
 cab.gif;
@@ -4458,6 +4701,7 @@ capapanel.gif;
 check.gif;
 class.gif;
 class_big.gif;
+closepage.gif;
 coolindiff.gif;
 coolsmile.gif;
 cry.gif;
@@ -4483,6 +4727,8 @@ frowny.gif;
 gif.gif;
 gif_big.gif;
 header.gif;
+helpdesk.gif;
+helpgateway.gif;
 hrrm.gif;
 htm.gif;
 html.gif;
@@ -4508,6 +4754,8 @@ lonlogo.gif;
 lonlogos.gif;
 lowerleft.gif;
 lowerright.gif;
+mailbkgrd.gif;
+mailto.gif;
 minilogo.gif;
 meta.gif;
 meta_big.gif;
@@ -4604,6 +4852,7 @@ Miscellaneous resources.
 </description>
 <filenames>
 authorfeed.gif;
+blackdot.gif;
 bomb.gif;
 smallFAQ.gif;
 smallBug.gif;
@@ -4643,6 +4892,24 @@ tested
 <status>works/unverified</status>
 </file>
 <file>
+  <source>loncom/lonlocal.pm</source>
+  <target dist='default'>home/httpd/lib/perl/LONCAPA/lonlocal.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+     lonc/d handler for doing a local filesystem based init:
+  </description>
+  <status>works/verified</status>
+</file>
+<file>
+  <source>loncom/lonssl.pm</source>
+  <target dist='default'>home/httpd/lib/perl/LONCAPA/lonssl.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+     lonc/d handler for doing a remote SSL based init:
+  </description>
+  <status>works/verified</status>
+</file>
+<file>
   <source>loncom/LondConnection.pm</source>
   <target dist='default'>home/httpd/lib/perl/LONCAPA/LondConnection.pm</target>
   <categoryname>system file</categoryname>
@@ -4969,6 +5236,7 @@ fvl.gif;
 csm.gif;
 nau.gif;
 nagoya.gif;
+colorado.gif;
 acadiau.gif;
 psuerie.gif;
 redford.gif;
@@ -4978,6 +5246,8 @@ ucsc.gif;
 waverly.gif;
 cmich.gif;
 UNICAMP.gif;
+lakefenton.gif;
+grandblanc.gif;
 glps.gif;
 BCHS.gif;
 headersfu.gif;
@@ -5000,6 +5270,7 @@ csm.tab;
 huji.tab;
 nau.tab;
 nagoya.tab;
+colorado.tab;
 acadiau.tab;
 psuerie.tab;
 redford.tab;
@@ -5007,6 +5278,8 @@ cmich.tab;
 ifusp.tab;
 ucsc.tab;
 UNICAMP.tab;
+lakefenton.tab;
+grandblanc.tab;
 fsu.tab;
 sfu.tab;
 wmston.tab;
@@ -5384,7 +5657,9 @@ javascript for handling client-side inte
 </description>
 </file>
 <file>
-<source>loncom/build/CHECKRPMS</source>
+<source dist='default'>loncom/build/CHECKRPMS.default</source>
+<source dist='fedora1'>loncom/build/CHECKRPMS.fedora</source>
+<source dist='fedora2'>loncom/build/CHECKRPMS.fedora</source>
 <target dist='default'>usr/local/loncapa/bin/CHECKRPMS</target>
 <categoryname>system script</categoryname>
 <description>
@@ -5519,6 +5794,22 @@ Appleshares access (Macintosh)
 </description>
 </file>
 <file>
+  <source>loncom/interface/lonhelpmenu.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonhelpmenu.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+    Creates a multipage help screen to help users out.
+  </description>
+</file>
+<file>
+  <source>loncom/interface/lonsupportreq.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonsupportreq.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+    Handler to make it easy for users to send a request to te helpdesk
+  </description>
+</file>
+<file>
   <source>loncom/interface/lonmodifycourse.pm</source>
   <target dist='default'>home/httpd/lib/perl/Apache/lonmodifycourse.pm</target>
   <categoryname>handler</categoryname>