--- doc/loncapafiles/loncapafiles.lpml	2004/06/14 16:43:35	1.365
+++ doc/loncapafiles/loncapafiles.lpml	2004/09/28 20:58:51	1.394
@@ -2,7 +2,7 @@
  "http://lpml.sourceforge.net/DTD/lpml.dtd">
 <!-- loncapafiles.lpml -->
 
-<!-- $Id: loncapafiles.lpml,v 1.365 2004/06/14 16:43:35 www Exp $ -->
+<!-- $Id: loncapafiles.lpml,v 1.394 2004/09/28 20:58:51 matthew Exp $ -->
 
 <!--
 
@@ -624,6 +624,14 @@ roles.db) which specify the roles and pr
 LON-CAPA system.</description>
 </directory>
 <directory dist='default'>
+  <protectionlevel>never_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/lonCerts</targetdir>
+  <categoryname>server standard</categoryname>
+  <description>
+    Directory for Certificates for SSL and local auth modes
+  </description>
+</directory>
+<directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/html/adm/MathML</targetdir>
   <categoryname>server readonly</categoryname>
@@ -1128,6 +1136,7 @@ dialog.js;
 htmlarea.js;
 popupdiv.js;
 popupwin.js;
+license.txt
 </filenames>
 </fileglob>
 <file>
@@ -1516,6 +1525,14 @@ Batch script for removing temporary tabl
 </description>
 </file>
 <file>
+<source>loncom/metadata_database/parse_activity_log.pl</source>
+<target dist='default'>home/httpd/perl/parse_activity_log.pl</target>
+<categoryname>script</categoryname>
+<description>
+Batch script to copy activy logs from native format into the SQL metadata database.
+</description>
+</file>
+<file>
 <source>loncom/misc/cleanup_file_caches.pl</source>
 <target dist='default'>home/httpd/perl/cleanup_file_caches.pl</target>
 <categoryname>script</categoryname>
@@ -1534,6 +1551,15 @@ nohist_accesscount.db.
 </description>
 </file>
 <file>
+<source>loncom/debugging_tools/modify_config_files.pl</source>
+<target dist='default'>home/httpd/perl/modify_config_files.pl</target>
+<categoryname>script</categoryname>
+<description>
+Batch script to ensure certain LONCAPA configuration parameters for yum and
+MySQL are included in their configuration files.
+</description>
+</file>
+<file>
 <source>loncom/lonhttpd</source>
 <target dist='default'>home/httpd/perl/lonhttpd</target>
 <categoryname>script</categoryname>
@@ -1624,7 +1650,9 @@ echo 'pod2html lond'
 </dependencies>
 </file>
 <file>
-<source>loncom/build/CHECKRPMS</source>
+<source dist='default'>loncom/build/CHECKRPMS.default</source>
+<source dist='fedora1'>loncom/build/CHECKRPMS.fedora</source>
+<source dist='fedora2'>loncom/build/CHECKRPMS.fedora</source>
 <target dist='default'>home/httpd/cgi-bin/CHECKRPMS</target>
 <categoryname>script</categoryname>
 <description>CGI script that checks status of RPMs</description>
@@ -1682,6 +1710,42 @@ echo 'pod2html lonsql'
 </dependencies>
 </file>
 <file>
+  <source>loncom/CrGrant.pl</source>
+  <target dist='default'>home/httpd/perl/CrGrant.pl</target>
+  <categoryname>script</categoryname>
+  <description>
+    Script used to verify and grant an SSL certificate to a Lon-CAPA host
+  </description>
+  <status>in progress</status>
+</file>
+<file>
+  <source>loncom/CrGenerate.pl</source>
+  <target dist='default'>home/httpd/perl/CrGenerate.pl</target>
+  <categoryname>script</categoryname>
+  <description>
+    Script used to request an SSL certificate for a Lon-CAPA host.
+  </description>
+  <status>in progress</status>
+</file>
+<file>
+  <source>loncom/lonManage</source>
+  <target dist='default'>home/httpd/perl/lonManage</target>
+  <categoryname>script</categoryname>
+  <description>
+    Script to push changes to hosts.tab and domain.tab out to Lon-CAPA servers
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/apachereload</source>
+  <target dist='default'>home/httpd/perl/apachereload</target>
+  <categoryname>setuid script</categoryname>
+  <description>
+    Script to let www reload the webserver
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
 <source>loncom/lcpasswd</source>
 <target dist='default'>home/httpd/perl/lcpasswd</target>
 <categoryname>setuid script</categoryname>
@@ -2097,6 +2161,14 @@ Index file for the help system
 </description>
 </file>
 <file>
+<source>loncom/html/adm/help/nohelptopic.html</source>
+<target dist='default'>home/httpd/html/adm/help/nohelptopic.html</target>
+<categoryname>interface file</categoryname>
+<description>
+Page of links to help manuals - displayed when inline help is missing for a specific topic.
+</description>
+</file>
+<file>
 <source>doc/help/author.manual.access.tex</source>
 <target dist='default'>home/httpd/html/adm/help/tex/author.manual.access.tex
 </target>
@@ -2176,6 +2248,54 @@ The PDF Course Manual
 </description>
 <status>works/unverified</status>
 </file>
+<file>
+  <source>loncom/html/adm/help/ext_examples.html</source>
+  <target dist='default'>home/httpd/html/adm/help/ext_examples.html</target>
+  <categoryname>interface file</categoryname>
+  <description>
+    Examples for using &EXT in HTML
+  </description>
+</file>
+<file>
+  <source>loncom/html/adm/help/ext_examples.html.meta</source>
+  <target dist='default'>home/httpd/html/adm/help/ext_examples.html.meta</target>
+  <categoryname>interface file</categoryname>
+  <description>
+    Examples for using &EXT in HTML metadata
+  </description>
+</file>
+<file>
+  <source>loncom/html/adm/help/ext_examples.library</source>
+  <target dist='default'>home/httpd/html/adm/help/ext_examples.library</target>
+  <categoryname>interface file</categoryname>
+  <description>
+    Examples for using &EXT library
+  </description>
+</file>
+<file>
+  <source>loncom/html/adm/help/ext_examples.library.meta</source>
+  <target dist='default'>home/httpd/html/adm/help/ext_examples.library.meta</target>
+  <categoryname>interface file</categoryname>
+  <description>
+    Examples for using &EXT library metadata
+  </description>
+</file>
+<file>
+  <source>loncom/html/adm/help/ext_examples.problem</source>
+  <target dist='default'>home/httpd/html/adm/help/ext_examples.problem</target>
+  <categoryname>interface file</categoryname>
+  <description>
+    Examples for using &EXT problem
+  </description>
+</file>
+<file>
+  <source>loncom/html/adm/help/ext_examples.problem.meta</source>
+  <target dist='default'>home/httpd/html/adm/help/ext_examples.problem.meta</target>
+  <categoryname>interface file</categoryname>
+  <description>
+    Examples for using &EXT problem metadata
+  </description>
+</file>
 <fileglob>
 <glob>*.*</glob>
 <sourcedir>loncom/html/adm/help/gif/</sourcedir>
@@ -2322,11 +2442,10 @@ About_Communication.tex;
 About_Developers_Manual.tex;
 About_Numerical_and_Formula_Response.tex;
 all_functions_table.tex;
+adaptive_hints.tex;
 Additional_Help.tex;
 Ambiguous_Reference.tex;
-Analysis_Analyze_as.tex;
 Analysis_Analyze_Over.tex;
-Analysis_num_plots.tex;
 Analyze_Problem.tex;
 Annotation.tex;
 Authentication.tex;
@@ -2378,6 +2497,7 @@ Cascading_Parameters.tex;
 Change_Colors.tex;
 Change_Password.tex;
 Chart_Description.tex;
+Change_Discussion_Display.tex;
 Chart_Output_Data.tex;
 Chart_Output_Formats.tex;
 Chatting.tex;
@@ -2453,6 +2573,7 @@ Docs_Supplemental.tex;
 Docs_Uploading_From_Harddrive.tex;
 Docs_Verify_Content.tex;
 Edit_Syllabus.tex;
+exam_basics.tex;
 Exploring_Your_Course.tex;
 Finding_Resources.tex;
 Foils.tex;
@@ -2484,6 +2605,7 @@ Login_To_LON-CAPA.tex;
 Metadata_Description.tex;
 Navigation_Screen.tex;
 Navmap_Host_Down.tex;
+NavMaps_MarkPosts_Read.tex;
 Numerical_Response_Advanced_Example.tex;
 Numerical_Response_Format.tex;
 Numerical_Response_Introduction.tex;
@@ -2495,6 +2617,7 @@ Numerical_Response_Randomization.tex;
 Numerical_Response_Simple_Example.tex;
 Numerical_Response_Tutorial_A.tex;
 Numerical_Response_Units.tex;
+numerical_wrong_answers.tex;
 Option_Response_Concept_Group_Example.tex;
 Option_Response_Matching_Example.tex;
 Option_Response_Problem_Creation.tex;
@@ -2510,6 +2633,7 @@ Prefs_About_Me.tex;
 Prefs_Forwarding.tex;
 Prefs_Language.tex;
 Prefs_Screen_Name_Nickname.tex;
+Print_Options.tex;
 Print_Resource.tex;
 Problem_Editor_Testing_Area.tex;
 Problem_Editor_XML_Index.tex;
@@ -2570,10 +2694,18 @@ Spreadsheet_Template_Row.tex;
 Spreadsheet_Ternary_Operator.tex;
 Spreadsheet_Tries.tex;
 Statistics_Overall_Key.tex;
+Statistics_Sequence.tex;
+Statistics_Cache.tex;
 String_Response_Problem_Creation.tex;
 String_Response_Problems.tex;
 Syllabus_ExtLink.tex;
 Syllabus_URLs.tex;
+TEXDropEmptyColumns_attribute.tex;
+TEXitemgroupwidth.tex;
+TEXlayout_attribute.tex;
+TEXsize_attribute.tex;
+TEXtype_attribute.tex;
+TEXwidth_attribute.tex;
 Tolerance.tex;
 Uploaded_Templates_PublicView.tex;
 Uploaded_Templates_TextBoxes.tex;
@@ -2631,7 +2763,7 @@ Handler to show statistics on solving LO
 <file>
 <source>loncom/interface/statistics/lonstathelpers.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonstathelpers.pm</target>
-<categoryname>module</categoryname>
+<categoryname>handler</categoryname>
 <description>
 Utility module for statistics and data mining.
 </description>
@@ -2647,6 +2779,15 @@ The module that generate the html for th
 </description>
 </file>
 <file>
+<source>loncom/interface/statistics/lonsurveyreports.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonsurveyreports.pm
+</target>
+<categoryname>handler</categoryname>
+<description>
+Gives instructors access to compiled survey results.
+</description>
+</file>
+<file>
 <source>loncom/interface/statistics/lonstudentsubmissions.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonstudentsubmissions.pm
 </target>
@@ -2977,6 +3118,14 @@ Contains a set of functions that generat
 </description>
 </file>
 <file>
+<source>loncom/interface/lonspeller.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonspeller.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Contains a set of functions to use Aspell
+</description>
+</file>
+<file>
 <source>loncom/localize/lonlocal.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonlocal.pm</target>
 <categoryname>handler</categoryname>
@@ -3371,6 +3520,15 @@ role of student in a course, and add the
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/lonviewclasslist.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonviewclasslist.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Allows users (including students) to view the classlist of their course.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/interface/lonmsg.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonmsg.pm</target>
 <categoryname>handler</categoryname>
@@ -3545,11 +3703,20 @@ Has routines which control the remote co
 <target dist='default'>home/httpd/lib/perl/Apache/lonremote.pm</target>
 <categoryname>handler</categoryname>
 <description>
-Handler to lauch and collapse the remote control.
+Handler to launch and collapse the remote control.
 </description>
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/portfolio.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/portfolio.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Handler to manage user portfolios
+</description>
+<status>unverified</status>
+</file>
+<file>
 <source>rat/lonpageflip.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonpageflip.pm</target>
 <categoryname>handler</categoryname>
@@ -4535,6 +4702,7 @@ capapanel.gif;
 check.gif;
 class.gif;
 class_big.gif;
+closepage.gif;
 coolindiff.gif;
 coolsmile.gif;
 cry.gif;
@@ -4560,6 +4728,8 @@ frowny.gif;
 gif.gif;
 gif_big.gif;
 header.gif;
+helpdesk.gif;
+helpgateway.gif;
 hrrm.gif;
 htm.gif;
 html.gif;
@@ -4683,6 +4853,7 @@ Miscellaneous resources.
 </description>
 <filenames>
 authorfeed.gif;
+blackdot.gif;
 bomb.gif;
 smallFAQ.gif;
 smallBug.gif;
@@ -5066,6 +5237,7 @@ fvl.gif;
 csm.gif;
 nau.gif;
 nagoya.gif;
+colorado.gif;
 acadiau.gif;
 psuerie.gif;
 redford.gif;
@@ -5099,6 +5271,7 @@ csm.tab;
 huji.tab;
 nau.tab;
 nagoya.tab;
+colorado.tab;
 acadiau.tab;
 psuerie.tab;
 redford.tab;
@@ -5485,7 +5658,9 @@ javascript for handling client-side inte
 </description>
 </file>
 <file>
-<source>loncom/build/CHECKRPMS</source>
+<source dist='default'>loncom/build/CHECKRPMS.default</source>
+<source dist='fedora1'>loncom/build/CHECKRPMS.fedora</source>
+<source dist='fedora2'>loncom/build/CHECKRPMS.fedora</source>
 <target dist='default'>usr/local/loncapa/bin/CHECKRPMS</target>
 <categoryname>system script</categoryname>
 <description>
@@ -5620,6 +5795,22 @@ Appleshares access (Macintosh)
 </description>
 </file>
 <file>
+  <source>loncom/interface/lonhelpmenu.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonhelpmenu.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+    Creates a multipage help screen to help users out.
+  </description>
+</file>
+<file>
+  <source>loncom/interface/lonsupportreq.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonsupportreq.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+    Handler to make it easy for users to send a request to te helpdesk
+  </description>
+</file>
+<file>
   <source>loncom/interface/lonmodifycourse.pm</source>
   <target dist='default'>home/httpd/lib/perl/Apache/lonmodifycourse.pm</target>
   <categoryname>handler</categoryname>