--- doc/loncapafiles/loncapafiles.lpml	2005/12/20 16:25:53	1.467
+++ doc/loncapafiles/loncapafiles.lpml	2006/08/11 22:07:32	1.497
@@ -2,7 +2,7 @@
  "http://lpml.sourceforge.net/DTD/lpml.dtd">
 <!-- loncapafiles.lpml -->
 
-<!-- $Id: loncapafiles.lpml,v 1.467 2005/12/20 16:25:53 www Exp $ -->
+<!-- $Id: loncapafiles.lpml,v 1.497 2006/08/11 22:07:32 albertel Exp $ -->
 
 <!--
 
@@ -546,6 +546,18 @@ extensions</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/html/adm/jsMath/extensions</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>jsMath extension files</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/html/adm/jsMath/uncompressed</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>jsMath files (uncompressed)</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/html/adm/jsMath/plugins</targetdir>
   <categoryname>server readonly</categoryname>
   <description>jsMath plugin files</description>
@@ -582,6 +594,12 @@ extensions</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/html/adm/help/tex/de</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>German online help documentation tex files</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/html/adm/help/png</targetdir>
   <categoryname>server readonly</categoryname>
   <description>online help documentation png files</description>
@@ -1126,6 +1144,23 @@ Meta file for generic resource for DOCS
 </description>
 </file>
 <file>
+<source>loncom/homework/templates/DropBox.problem</source>
+<target dist='default'>home/httpd/html/res/lib/templates/DropBox.problem</target>
+<categoryname>interface file</categoryname>
+<description>
+Generic resource for DOCS "Drop Box"
+</description>
+</file>
+<file>
+<source>loncom/homework/templates/DropBox.problem.meta</source>
+<target dist='default'>home/httpd/html/res/lib/templates/DropBox.problem.meta</target>
+<categoryname>interface file</categoryname>
+<description>
+Meta file for generic resource for DOCS "Drop Box"
+</description>
+</file>
+
+<file>
 <source>loncom/homework/templates/examupload.problem</source>
 <target dist='default'>home/httpd/html/res/lib/templates/examupload.problem</target>
 <categoryname>interface file</categoryname>
@@ -1339,6 +1374,8 @@ blank.problem;
 blank.problem.meta;
 ClickImageExample.problem;
 ClickImageExample.problem.meta;
+CustomResponse.problem;
+CustomResponse.problem.meta;
 Essay.problem;
 Essay.problem.meta;
 examupload.problem;
@@ -1533,6 +1570,14 @@ Example:<br /><nobr /><tt>server ntp.msu
 </note>
 </file>
 <file>
+  <source>loncom/misc/archive_old_files.pl</source>
+  <target dist='default'>home/httpd/perl/archive_old_files.pl</target>
+  <categoryname>script</categoryname>
+  <description>
+Batch script for compressing older .db files
+  </description>
+</file>
+<file>
 <source>loncom/metadata_database/searchcat.pl</source>
 <target dist='default'>home/httpd/perl/searchcat.pl</target>
 <categoryname>script</categoryname>
@@ -1584,6 +1629,14 @@ MySQL are included in their configuratio
 </description>
 </file>
 <file>
+  <source>loncom/debugging_tools/updateclasslist.pl</source>
+  <target dist='default'>home/httpd/perl/debug/updateclasslist.pl</target>
+  <categoryname>script</categoryname>
+  <description>
+propagate the ids in ids.db to all course classlists
+  </description>
+</file>
+<file>
 <source>loncom/lonhttpd</source>
 <target dist='default'>home/httpd/perl/lonhttpd</target>
 <categoryname>script</categoryname>
@@ -1600,6 +1653,14 @@ small script to handle the start up of t
 </description>
 </file>
 <file>
+  <source>loncom/lonmaxima</source>
+  <target dist='default'>home/httpd/perl/lonmaxima</target>
+  <categoryname>script</categoryname>
+  <description>
+    manages the existance and talking to the maxima processes
+  </description>
+</file>
+<file>
     <source>loncom/request_ssl_key.sh</source>
     <target dist='default'>home/httpd/lonCerts/request_ssl_key.sh</target>
     <categoryname>script</categoryname>
@@ -2051,6 +2112,15 @@ Handler for periodically fetch new lines
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/longroupchat.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/longroupchat.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Handler for generation of frameset for display of group chat
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/interface/lonannounce.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonannounce.pm</target>
 <categoryname>handler</categoryname>
@@ -2537,6 +2607,7 @@ Authoring_HTML_vs_Tex.tex;
 Authoring_ImageResponse.tex;
 Authoring_Input_Tags.tex;
 Authoring_Internal_Tags.tex;
+Authoring_Intro.tex;
 Authoring_M_Tag.tex;
 Authoring_NumericalResponse.tex;
 Authoring_OptionResponse.tex;
@@ -2548,6 +2619,7 @@ Authoring_Response_Attributes.tex;
 Authoring_Responseparam_Parameter.tex;
 Authoring_Response_Tag_Intro.tex;
 Authoring_Scripting_Tags.tex;
+Authoring_Spreadsheet.tex;
 Authoring_Structure_Tags.tex;
 Authoring_XML_Intro.tex;
 Author_LON-CAPA_Introduction.tex;
@@ -2577,6 +2649,7 @@ Chart_Student_Data.tex;
 Chatting.tex;
 Coauthor.tex;
 Construction_Space_Overview.tex;
+Contextual_Help.tex;
 Course_Add_Other.tex;
 Course_Add_Student.tex;
 Course_Automated_Enrollment.tex;
@@ -2585,6 +2658,7 @@ Course_Change_Privileges.tex;
 Course_Chart_To_Excel.tex;
 Course_Chat.tex;
 Course_Convert_To_CSV.tex;
+Course_Coordination_Intro.tex;
 Course_Create_Class_List.tex;
 Course_Critical_Message.tex;
 Course_Deleting.tex;
@@ -2619,6 +2693,7 @@ Creating_A_Course_Intro.tex;
 Creating_New_Content_Pages.tex;
 Creating_Online_Problems.tex;
 Creating_Radio_Response_Problems.tex;
+Custom_Response_Problems.tex;
 Developer_Manual_Title_Page.tex;
 Developer_Tutorial.tex;
 Distribute_Messages.tex;
@@ -2654,6 +2729,7 @@ Docs_Uploading_From_Harddrive.tex;
 Docs_Verify_Content.tex;
 Due_Date.tex;
 Edit_Syllabus.tex;
+Error.tex;
 exam_basics.tex;
 Exploring_Your_Course.tex;
 Feedback_Author.tex;
@@ -2721,6 +2797,7 @@ Option_Response_Problems.tex;
 Option_Response_Simple.tex;
 Other_Symbols.tex;
 Parameter_Helper.tex;
+Parameter_Manager.tex;
 Parameter_Overview.tex;
 Part_Tag_Edit_Help.tex;
 Personal_Info_Page.tex;
@@ -2799,10 +2876,12 @@ Statistics_Sequence.tex;
 Statistics_Cache.tex;
 String_Response_Problem_Creation.tex;
 String_Response_Problems.tex;
+Student_Intro.tex;
 Submission_Time_Analysis.tex;
 Syllabus_ExtLink.tex;
 Syllabus_URLs.tex;
 Table_Mode.tex;
+Testbank_Formatting.tex;
 TEXDropEmptyColumns_attribute.tex;
 TEXitemgroupwidth_attribute.tex;
 TEXitemgroup_attribute.tex;
@@ -2814,6 +2893,7 @@ Tries.tex;
 Tolerance.tex;
 Uploaded_Templates_PublicView.tex;
 Uploaded_Templates_TextBoxes.tex;
+Uploading_File_Options.tex;
 Variable_Naming_Conventions.tex;
 Variables_in_Scripts.tex;
 Variables_in_the_Answer_Block.tex;
@@ -2827,6 +2907,19 @@ Why_LON-CAPA.tex;
 </fileglob>
 <fileglob>
 <glob>*.*</glob>
+<sourcedir>loncom/html/adm/help/tex/de/</sourcedir>
+<targetdir dist='default'>
+home/httpd/html/adm/help/tex/de/</targetdir>
+<categoryname>interface file</categoryname>
+<description>
+German Tex files for the help system
+</description>
+<filenames>
+Tries.tex;
+</filenames>
+</fileglob>
+<fileglob>
+<glob>*.*</glob>
 <sourcedir>loncom/html/adm/help/tex/ru/</sourcedir>
 <targetdir dist='default'>
 home/httpd/html/adm/help/tex/ru/</targetdir>
@@ -2857,6 +2950,12 @@ Authoring_Adding_Pictures.tex;
 A gdbm file containing a label->tex file hash.
 </description>
 <status>works/unverified</status>
+<build trigger='always run'>
+loncom/build/rebuild_label_hash.sh
+</build>
+<dependencies>
+rebuild_label_hash.sh
+</dependencies>
 </file>
 <fileglob>
   <glob>*</glob>
@@ -2962,6 +3061,15 @@ This module provides detailed analysis a
 <status>works/unverified</status>
 </file>
 <file>
+  <source>loncom/interface/statistics/longradinganalysis.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/longradinganalysis.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+    This module provides detailed analysis and raw data for submissions of various problem types.
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
 <source>loncom/interface/statistics/lonsubmissiontimeanalysis.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonsubmissiontimeanalysis.pm
 </target>
@@ -3263,6 +3371,15 @@ coordinators.
 <status>works/unverified</status>
 </file>
 <file>
+  <source>loncom/interface/lonclonecourse.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonclonecourse.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+Internal routines for creating a clone of an existing course.
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
 <source>loncom/interface/loncreateuser.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/loncreateuser.pm</target>
 <categoryname>handler</categoryname>
@@ -3297,6 +3414,14 @@ Contains the &mt access function to Loca
 </description>
 </file>
 <file>
+  <source>loncom/localize/lonlocalize.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonlocalize.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+handler for &mt()ing static files
+  </description>
+</file>
+<file>
 <source>loncom/localize/localize.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/localize.pm</target>
 <categoryname>handler</categoryname>
@@ -3472,20 +3597,28 @@ jsMath is a Javascript solution to conve
 black.gif;
 blank.gif;
 COPYING.txt;
+jsMath-BaKoMa-fonts.js;
+jsMath-autoload.html;
+jsMath-controls.html;
 jsMath-fallback-mac.js;
 jsMath-fallback-mac-mozilla.js;
 jsMath-fallback-mac-msie.js;
 jsMath-fallback-pc.js;
 jsMath-fallback-symbols.js;
 jsMath-fallback-unix.js;
+jsMath-global-controls.html;
+jsMath-global.html;
 jsMath.js;
+jsMath-loader.html;
+jsMath-loader-omniweb4.js;
 jsMath-mozilla.js;
 jsMath-msie-mac.js;
+jsMath-old-browsers.js;
   </filenames>
 </fileglob>
 
 <file>
-  <source>loncom/html/adm/jsMath/jsMath-fonts-1.2.zip</source>
+  <source>loncom/html/adm/jsMath/jsMath-fonts-1.3.zip</source>
   <target dist='default'>home/httpd/html/adm/jsMath/fonts/</target>
   <categoryname>script</categoryname>
   <description>
@@ -3496,12 +3629,37 @@ commands /home/httpd/html/adm/jsMath
   </installscript>
   <dependencies>
 loncom/html/adm/jsMath/commands;
-loncom/html/adm/jsMath/jsMath-fonts-1.2.zip;
+loncom/html/adm/jsMath/jsMath-fonts-1.3.zip;
   </dependencies>
 </file>
 
 <fileglob>
   <glob>*.*</glob>
+  <sourcedir>loncom/html/adm/jsMath/extensions/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/jsMath/extensions/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+Additional jsMath functionality that can be used when needed.
+  </description>
+  <filenames>
+AMSsymbols.js;
+HTML.js;
+bbox.js;
+font.js;
+boldsymbol.js;
+double-click.js;
+fbox.js;
+leaders.js;
+mathchoice.js;
+mimeTeX.js;
+moreArrows.js;
+newcommand.js;
+underset-overset.js;
+  </filenames>
+</fileglob>
+
+<fileglob>
+  <glob>*.*</glob>
   <sourcedir>loncom/html/adm/jsMath/plugins/</sourcedir>
   <targetdir dist='default'>home/httpd/html/adm/jsMath/plugins/</targetdir>
   <categoryname>interface file</categoryname>
@@ -3510,12 +3668,36 @@ jsMath is a Javascript solution to conve
   </description>
   <filenames>
 autoload.js;
+CHMmode.js;
+global.js;
 mimeTeX.js;
+noCache.js;
+noGlobal.js;
 noImageFonts.js;
+spriteImageFonts.js;
 tex2math.js;
   </filenames>
 </fileglob>
 
+<fileglob>
+  <glob>*.*</glob>
+  <sourcedir>loncom/html/adm/jsMath/uncompressed/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/jsMath/uncompressed/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+the jsMath source files not compressed for increasing download speed (not used by lon-capa directly)
+  </description>
+  <filenames>
+def.js;
+font.js;
+jsMath-fallback-mac.js;
+jsMath-fallback-pc.js;
+jsMath-fallback-symbols.js;
+jsMath-fallback-unix.js;
+jsMath.js;
+  </filenames>
+</fileglob>
+
 <file>
 <source>loncom/interface/lontest.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lontest.pm</target>
@@ -3616,6 +3798,15 @@ echo 'pod2html lonnavmaps.pm'
 </dependencies>
 </file>
 <file>
+<source>loncom/interface/lonselstudent.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonselstudent.pm</target>
+<categoryname>standard</categoryname>
+<description>
+re-usable student selection subs.
+</description>
+<status>testing/unverified</status>
+</file>
+<file>
 <source>loncom/interface/lonhelper.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonhelper.pm</target>
 <categoryname>handler</categoryname>
@@ -3785,6 +3976,33 @@ adding, expiring or deleting group membe
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/longroup.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/longroup.pm</target>
+<categoryname>handler</categoryname>
+<description>
+General routines used to gather information about courses in a group, and their settings, and also to perform auto-group adds/drops when a user's role assignment changes.    
+</description>
+<status>works/unverified</status>
+</file>
+<file>
+<source>loncom/interface/groupboards.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/groupboards.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Displays bulletin boards in a group and provides a mechanism for users with board creation privileges in a group to create new bulletin boards.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
+<source>loncom/interface/grouproster.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/grouproster.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Display group membership information. Type of information available depends on group privileges of the user.  
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/interface/lonmsg.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonmsg.pm</target>
 <categoryname>handler</categoryname>
@@ -3794,12 +4012,20 @@ author_res_msg - send message to resourc
 user_crit_msg - send a critical message to a user. A critical message
 will require acknowledgment by the recipient and the sender will be notified.
 user_crit_received - routine to trigger acknowledgment.
-statuschange - change the status of a message (read, replied, forwarded, etc).
-The handler also displays messages, has routines to reply, etc.
 </description>
 <status>works/unverified</status>
 </file>
 <file>
+  <source>loncom/interface/lonmsgdisplay.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonmsgdisplay.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+statuschange - change the status of a message (read, replied, forwarded, etc).
+The handler displays messages, has routines to reply, etc.
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
 <source>loncom/homework/hint.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/hint.pm</target>
 <categoryname>handler</categoryname>
@@ -3964,6 +4190,15 @@ Has routines which control the remote co
 <status>works/unverified</status>
 </file>
 <file>
+  <source>loncom/interface/lonmainmenu.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonmainmenu.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+Displays the Main menu
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
 <source>loncom/interface/lonremote.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonremote.pm</target>
 <categoryname>handler</categoryname>
@@ -4320,6 +4555,15 @@ handles request to the CAPA homework pro
 <status>works/unverified</status>
 </file>
 <file>
+  <source>loncom/homework/lonmaxima.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonmaxima.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+    routines to simplify talking to the maxima client
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
 <source>loncom/xml/Safe.pm</source>
 <target dist='default'>home/httpd/lib/perl/Safe.pm</target>
 <categoryname>handler</categoryname>
@@ -4438,6 +4682,15 @@ Encryption and decryption of URIs
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/lonencurl.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonencurl.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Handler that takes care of decrypting request URL's
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>doc/man/Apache__lonracc.3</source>
 <target dist='default'>usr/man/man3/Apache::lonracc.3</target>
 <categoryname>doc</categoryname>
@@ -4528,6 +4781,13 @@ loncom/build/pod2html.sh ../auth/loncacc
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/auth/restrictedaccess.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/restrictedaccess.pm</target>
+<categoryname>handler</categoryname>
+<description>Passphrase entry form and verification for access to passphrase-protected portfolio files</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/auth/londatecheck.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/londatecheck.pm</target>
 <categoryname>handler</categoryname>
@@ -4535,6 +4795,13 @@ loncom/build/pod2html.sh ../auth/loncacc
 <status>works/unverified</status>
 </file>
 <file>
+  <source>loncom/auth/publiccheck.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/publiccheck.pm</target>
+  <categoryname>handler</categoryname>
+  <description>Checks if resource is public and allows unauthenticated access if it is.</description>
+  <status>works/unverified</status>
+</file>
+<file>
 <source>loncom/auth/lonlogout.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonlogout.pm</target>
 <categoryname>handler</categoryname>
@@ -4563,6 +4830,13 @@ loncom/build/pod2html.sh ../auth/loncacc
   <status>works/unverified</status>
 </file>
 <file>
+  <source>loncom/auth/simpleauthen.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/simpleauthen.pm</target>
+  <categoryname>handler</categoryname>
+  <description>Always returns DENIED</description>
+  <status>works/unverified</status>
+</file>
+<file>
 <source>loncom/lonnet/perl/lonrep.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonrep.pm</target>
 <categoryname>handler</categoryname>
@@ -4976,7 +5250,8 @@ lonlogo_broken.gif;
 lonlogo_broken_tsp.gif;
 lonlogo_broken.eps;
 lonlogo_broken.jpg;
-lonlogo_broken.mov
+lonlogo_broken.mov;
+genericstudent_tn.gif
 </filenames>
 </fileglob>
 <fileglob>
@@ -5007,6 +5282,7 @@ check.gif;
 class.gif;
 class_big.gif;
 closepage.gif;
+clickhere.gif;
 coolindiff.gif;
 coolsmile.gif;
 cry.gif;
@@ -5499,6 +5775,23 @@ Provides many functions for the &lt;scri
 Functions are documented in CVS:loncapa/doc/homework/homework5.html.
 </description>
 </file>
+
+<file>
+  <source>loncom/homework/task.css</source>
+  <target dist='default'>home/httpd/html/res/adm/includes/task.css</target>
+  <categoryname>handler</categoryname>
+  <description>
+    Style definitions for task display
+  </description>
+</file>
+<file>
+  <source>loncom/homework/task_grading.js</source>
+  <target dist='default'>home/httpd/html/res/adm/includes/task_grading.js</target>
+  <categoryname>handler</categoryname>
+  <description>
+    Javascript to make the grading screen of task easier to use
+  </description>
+</file>
 <file>
 <source>loncom/homework/capa.units</source>
 <target dist='default'>home/httpd/html/res/adm/includes/capa.units</target>
@@ -6178,6 +6471,22 @@ Appleshares access (Macintosh)
 </description>
 </file>
 <file>
+  <source>loncom/interface/loncss.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/loncss.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+    Generates standard LON-CAPA CSS
+  </description>
+</file>
+<file>
+  <source>loncom/LONCAPA.pm</source>
+  <target dist='default'>home/httpd/lib/perl/LONCAPA.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+    Some basic Lon-CAPA functionality
+  </description>
+</file>
+<file>
   <source>loncom/interface/lonnotify.pm</source>
   <target dist='default'>home/httpd/lib/perl/Apache/lonnotify.pm</target>
   <categoryname>handler</categoryname>