--- doc/loncapafiles/loncapafiles.lpml	2001/10/09 21:29:07	1.44
+++ doc/loncapafiles/loncapafiles.lpml	2001/11/25 23:55:07	1.52
@@ -42,10 +42,10 @@
   <chmod dist='default'>0644</chmod><chown dist='default'>root:root</chown>
 </category>
 <category name="script" type="runtime">
-  <chmod dist='default'>0700</chmod><chown dist='default'>www:www</chown>
+  <chmod dist='default'>0500</chmod><chown dist='default'>www:www</chown>
 </category>
 <category name="script" type="development">
-  <chmod dist='default'>0500</chmod><chown dist='default'>www:www</chown>
+  <chmod dist='default'>0700</chmod><chown dist='default'>www:www</chown>
 </category>
 <category name="graphic file" type="runtime">
   <chmod dist='default'>0444</chmod><chown dist='default'>root:root</chown>
@@ -156,6 +156,12 @@ echo '**********************************
   <description>configuration directory for network time protocol</description>
 </directory>
 <directory>
+  <targetdir dist='default'>etc/pam.d</targetdir>
+  <categoryname>standard</categoryname>
+  <description>configuration directory for password authentication mechanism
+  </description>
+</directory>
+<directory>
   <targetdir dist='default'>etc/rc.d/init.d</targetdir>
   <targetdir dist='redhat7.1 debian2.2'>etc/init.d</targetdir>
   <categoryname>standard</categoryname>
@@ -480,6 +486,15 @@ well as causing the Apache module to be
 </description>
 </file>
 <file>
+<source>loncom/publisher/thesaurus.dat</source>
+<target dist='default'>home/httpd/lonTabs/thesaurus.dat</target>
+<categoryname>static conf</categoryname>
+<description>
+Custom Thesaurus file for LON-CAPA, in the format
+word@wordID@frequency@relatedwordID:frequency,relatedwordID:frequency,...
+</description>
+</file>
+<file>
 <source>loncom/interface/mydesk.tab</source>
 <target dist='default'>home/httpd/lonTabs/mydesk.tab</target>
 <categoryname>static conf</categoryname>
@@ -505,6 +520,18 @@ parameter.
 </description>
 </file>
 <file>
+<source>loncom/cgi/graph.gif</source>
+<target dist='default'>home/httpd/cgi-bin/graph.gif</target>
+<categoryname>script</categoryname>
+<description>
+Dynamically outputs a graph especially for lonstatistics.pm.
+</description>
+<note>
+Depends on perl modules:
+GDGraph-1.33 and GDTextUtils-0.80.
+</note>
+</file>
+<file>
 <source>loncom/cgi/metadata_keywords.pl</source>
 <target dist='default'>home/httpd/cgi-bin/metadata_keywords.pl</target>
 <categoryname>script</categoryname>
@@ -569,6 +596,18 @@ Describes what tags are allowed inside o
 </description>
 </file>
 <file>
+<source>CAPA/JavaTools/GLabel.class</source>
+<target dist='default'>home/httpd/html/res/adm/includes/GLabel.class
+</target>
+<categoryname>static conf</categoryname>
+<description>
+Java applet for labelling graphs.
+</description>
+<note>
+Built from Glabel.java.  Still working on build/dependency details.
+</note>
+</file>
+<file>
 <source>loncom/interface/default.assesscalc</source>
 <target dist='default'>home/httpd/html/res/adm/includes/default.assesscalc
 </target>
@@ -734,28 +773,37 @@ tmpput, tmpget, and ls).
 <target dist='default'>home/httpd/perl/lcpasswd</target>
 <categoryname>setuid script</categoryname>
 <description>
-coordinates the system services and files in order to allow lond to change
-user passwords
+Coordinates the system services and files in order to allow lond to change
+user passwords.
 </description>
-<status>deprecated</status>
+<status>being updated</status>
+</file>
+<file>
+<source>loncom/pwchange</source>
+<target dist='default'>home/httpd/perl/pwchange</target>
+<categoryname>setuid script</categoryname>
+<description>
+Allows www to change user passwords.
+</description>
+<status>being updated</status>
 </file>
 <file>
 <source>loncom/lcuseradd</source>
 <target dist='default'>home/httpd/perl/lcuseradd</target>
 <categoryname>setuid script</categoryname>
 <description>
-coordinates the system services and files in order to allow lond to add a
-new user
+Coordinates the system services and files in order to allow lond to add a
+new user.
 </description>
-<status>deprecated</status>
+<status>being updated</status>
 </file>
 <file>
 <source>loncom/lcuserdel</source>
 <target dist='default'>home/httpd/perl/lcuserdel</target>
 <categoryname>setuid script</categoryname>
 <description>
-coordinates the system services and files in order to allow lond to delete a
-user
+Coordinates the system services and files in order to allow lond to delete a
+user.
 </description>
 <status>deprecated</status>
 </file>
@@ -824,7 +872,7 @@ content.
 <file>
 <source>loncom/publisher/packages.tab</source>
 <target dist='default'>home/httpd/lonTabs/packages.tab</target>
-<categoryname>conf</categoryname>
+<categoryname>static conf</categoryname>
 <description>
 Parameter packages, so that assessments can publish parameter packages
 needed, which are then expanded into individual parameters - allows to
@@ -1791,6 +1839,8 @@ gif_big.gif;
 htm.gif;
 html.gif;
 html_big.gif;
+jar.gif;
+jar_big.gif;
 jpg.gif;
 jpg_big.gif;
 liteani.gif;
@@ -1881,7 +1931,8 @@ perl module for invoking functions speci
 <note>
 Has the same dependencies and build process as tth.so.
 Currently, only the tth.so file specifications invoke
-the build process however.
+the build process however.  A static version is checked into loncom/xml
+and in this way is treated as though it isn't part of the tth build process.
 </note>
 <status>works/unverified</status>
 </file>
@@ -1916,6 +1967,7 @@ modules/TexConvert/tthperl/commands
 <description>
 perl module for invoking functions specific to CAPA
 </description>
+<buildlink>loncom/homework/caparesponse/capa.so</buildlink>
 <note>
 Has the same dependencies and build process as capa.so.
 Currently, only the capa.so file specifications invoke
@@ -1931,6 +1983,7 @@ the build process however.
 bootstrap file associated with dynamic loading of this module on multiple
 architectures
 </description>
+<buildlink>loncom/homework/caparesponse/capa.so</buildlink>
 <note>
 Has the same dependencies and build process as capa.so.
 Currently, only the capa.so file specifications invoke
@@ -2370,6 +2423,22 @@ file that stimulates running of ntpdate
 </note>
 </file>
 <file>
+<source>loncom/pam.d/pwauth</source>
+<target dist='default'>etc/pam.d/pwauth</target>
+<categoryname>static conf</categoryname>
+<description>
+file that allows setuid password privileges for pwauth executable
+</description>
+</file>
+<file>
+<source>loncom/pam.d/pwchange</source>
+<target dist='default'>etc/pam.d/pwchange</target>
+<categoryname>static conf</categoryname>
+<description>
+file that allows setuid password privileges for pwchange (lcpasswd) executable
+</description>
+</file>
+<file>
 <source>loncom/init.d/loncontrol</source>
 <target dist='default'>etc/rc.d/init.d/loncontrol</target>
 <categoryname>root script</categoryname>