--- doc/loncapafiles/loncapafiles.lpml	2007/08/25 00:01:32	1.554
+++ doc/loncapafiles/loncapafiles.lpml	2008/09/05 17:43:32	1.610
@@ -2,7 +2,7 @@
  "http://lpml.sourceforge.net/DTD/lpml.dtd">
 <!-- loncapafiles.lpml -->
 
-<!-- $Id: loncapafiles.lpml,v 1.554 2007/08/25 00:01:32 albertel Exp $ -->
+<!-- $Id: loncapafiles.lpml,v 1.610 2008/09/05 17:43:32 raeburn Exp $ -->
 
 <!--
 
@@ -363,6 +363,18 @@ Used by lond parent to check if children
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/captchaspool</targetdir>
+  <categoryname>server standard</categoryname>
+  <description>for temporary storage of Captcha images</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/captchadb</targetdir>
+  <categoryname>server standard</categoryname>
+  <description>for temporary storage of Captcha codes</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/lib</targetdir>
   <categoryname>server readonly</categoryname>
   <description>location of LON-CAPA software modules and
@@ -463,111 +475,99 @@ extensions</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/htmlarea</targetdir>
-  <categoryname>server readonly</categoryname>
-  <description>Web directory for HTMLArea</description>
-</directory>
-<directory dist='default'>
-  <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/htmlarea/images</targetdir>
-  <categoryname>server readonly</categoryname>
-  <description>Images for HTMLArea</description>
-</directory>
-<directory dist='default'>
-  <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/htmlarea/lang</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/rat</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>Language files for HTMLArea</description>
+  <description>home of the rat</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/htmlarea/plugins</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/fonts</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>Plugins for HTMLArea</description>
+  <description>fonts</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/htmlarea/plugins/FullPage</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/help</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>FullPage plugin for HTMLArea</description>
+  <description>online help documentation</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/htmlarea/plugins/FullPage/img</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/jme</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>FullPage plugin for HTMLArea</description>
+  <description>JME support files</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/htmlarea/plugins/FullPage/lang</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/jmol</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>FullPage plugin for HTMLArea</description>
+  <description>Jmol files</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/htmlarea/plugins/FullPage/popups</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/jsMath</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>FullPage plugin for HTMLArea</description>
+  <description>jsMath support files</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/htmlarea/popups</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/jsMath/extensions</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>Popup windows for HTMLArea</description>
+  <description>jsMath extension files</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/rat</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/jsMath/uncompressed</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>home of the rat</description>
+  <description>jsMath files (uncompressed)</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/fonts</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/jsMath/plugins</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>fonts</description>
+  <description>jsMath plugin files</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/help</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/dragmath</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>online help documentation</description>
+  <description>Formula editor</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/jme</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>JME support files</description>
+  <description>Formula editor applet directory and popups</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/jmol</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>Jmol files</description>
+  <description>Formula editor applet classes</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/jsMath</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/HotEqn</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>jsMath support files</description>
+  <description>Formula editor applet HotEqn classes and jar</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/jsMath/extensions</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes/Display</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>jsMath extension files</description>
+  <description>Formula editor applet display</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/jsMath/uncompressed</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes/lang</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>jsMath files (uncompressed)</description>
+  <description>Formula editor applet languages</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/jsMath/plugins</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes/formats</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>jsMath plugin files</description>
+  <description>Formula editor applet classes formats (LaTeX, Maxima, etc)</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
@@ -859,7 +859,7 @@ each list element consists of only two s
 <file>
 <source>loncom/loncapa.conf</source>
 <target dist='default'>etc/httpd/conf/loncapa.conf</target>
-<target dist='sles10 suse10.1 suse10.2'>etc/apache2/loncapa.conf</target>
+<target dist='sles10 suse10.1 suse10.2 suse10.3'>etc/apache2/loncapa.conf</target>
 <categoryname>conf</categoryname>
 <description>
 <p>
@@ -902,7 +902,7 @@ MySQL database</td></tr>
 <file>
 <source>loncom/loncapa_apache.conf</source>
 <target dist='default'>etc/httpd/conf/loncapa_apache.conf</target>
-<target dist='sles10 suse10.1 suse10.2'>etc/apache2/loncapa_apache.conf</target>
+<target dist='sles10 suse10.1 suse10.2 suse10.3'>etc/apache2/loncapa_apache.conf</target>
 <categoryname>static conf</categoryname>
 <description>
 The goal of this file is to implement all LON-CAPA specific
@@ -922,7 +922,7 @@ the www@localhost MySQL password, and br
 <file>
 <source>loncom/startup.pl</source>
 <target dist='default'>etc/httpd/conf/startup.pl</target>
-<target dist='sles10 suse10.1 suse10.2'>etc/apache2/startup.pl</target>
+<target dist='sles10 suse10.1 suse10.2 suse10.3'>etc/apache2/startup.pl</target>
 <categoryname>static conf</categoryname>
 <description>
 This file provides initializations for perl handlers.  It adjusts what
@@ -1208,188 +1208,6 @@ Meta file for generic resource for score
 </description>
 </file>
 <fileglob>
-<glob>*.js</glob>
-<sourcedir>loncom/html/htmlarea/</sourcedir>
-<targetdir dist='default'>
-home/httpd/html/htmlarea/</targetdir>
-<categoryname>interface file</categoryname>
-<description>
-Files belonging to HTMLArea.
-</description>
-<filenames>
-dialog.js;
-htmlarea.js;
-popupdiv.js;
-popupwin.js;
-license.txt
-</filenames>
-</fileglob>
-<file>
-<source>loncom/html/htmlarea/htmlarea.css</source>
-<target dist='default'>home/httpd/html/htmlarea/htmlarea.css</target>
-<categoryname>interface file</categoryname>
-<description>
-Stylesheet for HTMLArea
-</description>
-</file>
-<file>
-<source>loncom/html/htmlarea/plugins/FullPage/full-page.js</source>
-<target dist='default'>home/httpd/html/htmlarea/plugins/FullPage/full-page.js</target>
-<categoryname>interface file</categoryname>
-<description>
-FullPage plugin for HTMLArea
-</description>
-</file>
-<fileglob>
-<glob>*.js</glob>
-<sourcedir>loncom/html/htmlarea/plugins/FullPage/lang/</sourcedir>
-<targetdir dist='default'>
-home/httpd/html/htmlarea/plugins/FullPage/lang/</targetdir>
-<categoryname>interface file</categoryname>
-<description>
-Language files belonging to FullPage plugin for HTMLArea.
-</description>
-<filenames>
-en.js;
-ro.js;
-</filenames>
-</fileglob>
-<fileglob>
-<glob>*.gif</glob>
-<sourcedir>loncom/html/htmlarea/plugins/FullPage/img/</sourcedir>
-<targetdir dist='default'>
-home/httpd/html/htmlarea/plugins/FullPage/img/</targetdir>
-<categoryname>interface file</categoryname>
-<description>
-Image files belonging to FullPage plugin for HTMLArea.
-</description>
-<filenames>
-docprop.gif;
-</filenames>
-</fileglob>
-<fileglob>
-<glob>*.html</glob>
-<sourcedir>loncom/html/htmlarea/plugins/FullPage/popups/</sourcedir>
-<targetdir dist='default'>
-home/httpd/html/htmlarea/plugins/FullPage/popups/</targetdir>
-<categoryname>interface file</categoryname>
-<description>
-Popup files belonging to FullPage plugin for HTMLArea.
-</description>
-<filenames>
-docprop.html;
-</filenames>
-</fileglob>
-<fileglob>
-<glob>*.js</glob>
-<sourcedir>loncom/html/htmlarea/lang/</sourcedir>
-<targetdir dist='default'>
-home/httpd/html/htmlarea/lang/</targetdir>
-<categoryname>interface file</categoryname>
-<description>
-Files belonging to HTMLArea.
-</description>
-<filenames>
-b5.js;
-de.js;
-fi.js;
-it.js;
-nl.js;
-ro.js;
-vn.js;
-en.js;
-fr.js;
-ja-utf8.js;
-pl.js;
-ru.js;
-da.js;
-es.js;
-gb.js;
-nb.js;
-pt_br.js;
-se.js;
-he.js;
-hu.js;
-</filenames>
-</fileglob>
-<fileglob>
-<glob>*.*</glob>
-<sourcedir>loncom/html/htmlarea/popups/</sourcedir>
-<targetdir dist='default'>
-home/httpd/html/htmlarea/popups/</targetdir>
-<categoryname>interface file</categoryname>
-<description>
-Files belonging to HTMLArea.
-</description>
-<filenames>
-about.html;
-insert_image.html;
-old_insert_image.html;
-blank.html;
-editor_help.html;
-insert_table.html;
-custom2.html;
-fullscreen.html;
-old-fullscreen.html;
-select_color.html;
-popup.js;
-link.html;
-</filenames>
-</fileglob>
-<fileglob>
-<glob>*.gif</glob>
-<sourcedir>loncom/html/htmlarea/images/</sourcedir>
-<targetdir dist='default'>
-home/httpd/html/htmlarea/images/</targetdir>
-<categoryname>interface file</categoryname>
-<description>
-Files belonging to HTMLArea.
-</description>
-<filenames>
-ed_left_to_right.gif;
-ed_right_to_left.gif;
-ed_save.gif;
-ed_delete.gif;
-ed_link.gif;
-ed_about.gif;
-ed_format_bold.gif;
-ed_list_bullet.gif;
-ed_align_center.gif;
-ed_format_italic.gif;
-ed_list_num.gif;
-ed_align_justify.gif;
-ed_format_strike.gif;
-ed_paste.gif;
-ed_align_left.gif;
-ed_format_sub.gif;
-ed_redo.gif;
-ed_align_right.gif;
-ed_format_sup.gif;
-ed_show_border.gif;
-ed_blank.gif;
-ed_format_underline.gif;
-ed_splitcel.gif;
-ed_charmap.gif;
-ed_help.gif;
-ed_undo.gif;
-ed_color_bg.gif;
-ed_hr.gif;
-fullscreen_maximize.gif;
-ed_color_fg.gif;
-ed_html.gif;
-fullscreen_minimize.gif;
-ed_copy.gif;
-ed_image.gif;
-insert_table.gif;
-ed_custom.gif;
-ed_indent_less.gif;
-ed_cut.gif;
-ed_indent_more.gif;
-ed_math.gif;
-ed_math_eqn.gif;
-</filenames>
-</fileglob>
-<fileglob>
 <glob>*.*</glob>
 <sourcedir>loncom/homework/templates/</sourcedir>
 <targetdir dist='default'>
@@ -1463,6 +1281,8 @@ StringResponse.problem;
 StringResponse.problem.meta;
 SimpleMatching.problem;
 SimpleMatching.problem.meta;
+SimpleMathResponse.problem;
+SimpleMathResponse.problem.meta;
 SimpleRank.problem;
 SimpleRank.problem.meta;
 SimpleTrueFalse.problem;
@@ -2043,6 +1863,14 @@ Different configs for scantron input fil
 </description>
 </file>
 <file>
+<source>loncom/homework/default_scantronformat.tab</source>
+<target dist='default'>home/httpd/lonTabs/default_scantronformat.tab</target>
+<categoryname>static conf</categoryname>
+<description>
+Default configurations for scantron input files.
+</description>
+</file>
+<file>
 <source>loncom/publisher/packages.tab</source>
 <target dist='default'>home/httpd/lonTabs/packages.tab</target>
 <categoryname>static conf</categoryname>
@@ -2204,6 +2032,15 @@ Handler to pick a courseid from a list o
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/lonpickauthor.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonpickauthor.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Handler for a DC to pick an author from a list of authors in the domain for an ad hoc CA role
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/interface/lonbulletin.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonbulletin.pm</target>
 <categoryname>handler</categoryname>
@@ -2299,6 +2136,14 @@ buildMakeWrapper
 </dependencies>
 </file>
 <file>
+<source>loncom/html/adm/help/help.png</source>
+<target dist='default'>home/httpd/html/adm/help/help.png</target>
+<categoryname>interface file</categoryname>
+<description>
+help icon
+</description>
+</file>
+<file>
 <source>loncom/html/adm/help/abouthelp.html</source>
 <target dist='default'>home/httpd/html/adm/help/abouthelp.html</target>
 <categoryname>interface file</categoryname>
@@ -2337,6 +2182,17 @@ manual online, with a somewhat clumsy in
 <status>works/unverified</status>
 </file>
 <file>
+<source>doc/help/domain.manual.access.tex</source>
+<target dist='default'>home/httpd/html/adm/help/tex/domain.manual.access.tex
+</target>
+<categoryname>interface file</categoryname>
+<description>
+The pseudo-LaTeX file to allow people to read the domain coordination
+manual online, with a somewhat clumsy interface.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>doc/help/author.manual.ps</source>
 <target dist='default'>home/httpd/html/adm/help/author.manual.ps</target>
 <categoryname>interface file</categoryname>
@@ -2395,6 +2251,35 @@ The PDF Course Manual
 <status>works/unverified</status>
 </file>
 <file>
+<source>doc/help/domain.manual.ps</source>
+<target dist='default'>home/httpd/html/adm/help/domain.manual.ps</target>
+<categoryname>interface file</categoryname>
+<description>
+The postscript Domain Manual
+</description>
+<status>works/unverified</status>
+<dependencies>
+doc/help/domain.manual.texxml;
+doc/help/latexSplitter.py;
+doc/help/rebuildLabelHash.pl;
+doc/help/render.texxml.pl;
+doc/help/simpleEdit.py;
+doc/help/texxml2indextex.pl;
+doc/help/texxml2latex.pl;
+loncom/build/buildHelp.sh;
+loncom/build/help_graphics_converter.pl
+</dependencies>
+</file>
+<file>
+<source>doc/help/domain.manual.pdf</source>
+<target dist='default'>home/httpd/html/adm/help/domain.manual.pdf</target>
+<categoryname>interface file</categoryname>
+<description>
+The PDF Domain Manual
+</description>
+<status>works/unverified</status>
+</file>
+<file>
   <source>loncom/html/adm/help/ext_examples.html</source>
   <target dist='default'>home/httpd/html/adm/help/ext_examples.html</target>
   <categoryname>interface file</categoryname>
@@ -2474,6 +2359,7 @@ constructionSpace.gif;
 constructionSpaceForPublishing.gif;
 creatingANewCourse.gif;
 creatingNewProblemResource.gif;
+cprv.gif;
 dynamic_piecewise.gif;
 dynamic_piecewise2.gif;
 dynamic_plot.gif;
@@ -2502,6 +2388,7 @@ numericalResponseSlopeProblem.gif;
 numericalResponseVarInText.gif;
 optionResponseEditing.gif;
 optionResponseProblem.gif;
+pref.gif;
 publishMetadata.gif;
 radioResponse2.gif;
 radioResponseHint.gif;
@@ -2640,7 +2527,7 @@ Authoring_ImageResponse.tex;
 Authoring_Input_Tags.tex;
 Authoring_Internal_Tags.tex;
 Authoring_Intro.tex;
-Authoring_M_Tag.tex;
+Authoring_Math_Editor.tex;
 Authoring_NumericalResponse.tex;
 Authoring_OptionResponse.tex;
 Authoring_Output_Tags.tex;
@@ -2726,12 +2613,14 @@ Course_Feedback_Addresses.tex;
 Course_Homework_Performance_Overview.tex;
 Course_Manually_Grade_Problem.tex;
 Course_Manual_Title_Page.tex;
+Course_Manage_Group.tex;
 Course_Maximum_Collaborators.tex;
 Course_Message_Access.tex;
 Course_Modify_Student_Data.tex;
 Course_Parameter_Levels.tex;
 Course_Parameter_Table_Mode.tex;
 Course_Problem_Weight.tex;
+Course_Self_Enrollment.tex;
 Course_Set_Start_End_Date.tex;
 Course_Setting_Parameters.tex;
 Course_Student_Grade_Override.tex;
@@ -2742,6 +2631,7 @@ Course_User_Parameter.tex;
 Course_View_Class_List.tex;
 Create_Course.tex;
 Creating_A_Course_Intro.tex;
+Creating_Domain_Coordinators.tex;
 Creating_Groups.tex;
 Creating_New_Content_Pages.tex;
 Creating_Online_Problems.tex;
@@ -2781,6 +2671,22 @@ Docs_String_Response.tex;
 Docs_Supplemental.tex;
 Docs_Uploading_From_Harddrive.tex;
 Docs_Verify_Content.tex;
+Domain_Configuration_Auto_Enrollment.tex;
+Domain_Configuration_Auto_Updates.tex;
+Domain_Configuration_Cataloging_Courses.tex;
+Domain_Configuration_Color_Schemes.tex;
+Domain_Configuration_Contact_Info.tex;
+Domain_Configuration_InstDirectory_Search.tex;
+Domain_Configuration_LangTZAuth.tex;
+Domain_Configuration_Login_Page.tex;
+Domain_Configuration_Quotas.tex;
+Domain_Configuration_Scantron_Format.tex;
+Domain_Configuration_User_Creation.tex;
+Domain_Configuration_User_Modification.tex;
+Domain_Coordination_Intro.tex;
+Domain_Coordination_Overview.tex;
+Domain_Crontab_Entries.tex;
+Domain_Manual_Title_Page.tex;
 Due_Date.tex;
 Edit_Syllabus.tex;
 Error.tex;
@@ -2801,6 +2707,8 @@ Feedback_Discussion.tex;
 Feedback_Policy.tex;
 Finding_Resources.tex;
 Foils.tex;
+Formula_Answers.tex;
+Formula_Editor.tex;
 Formula_Response_Adv_Intro.tex;
 Formula_Response_Example.tex;
 Formula_Response_Limitations.tex;
@@ -2829,11 +2737,18 @@ Guts_User_Dir.tex;
 Help.tex;
 Helper_Course_Initialization.tex;
 How_To_Edit_Existing_Content_Pages.tex;
+Institutional_Integration_Authentication.tex;
+Institutional_Integration_Course_Codes.tex;
+Institutional_Integration_Format_Checks.tex;
+Institutional_Integration_Identity_Management.tex;
+Institutional_Integration_User_Categories.tex;
 Latex_Footer.tex;
 Latex_Header.tex;
 Leaving_Feedback.tex;
 Login_To_LON-CAPA.tex;
 Math_Response_Problems.tex;
+Maxima_Argument_Array.tex;
+Maxima_Libraries.tex;
 Metadata_Description.tex;
 Navigation_Screen.tex;
 Navmap_Host_Down.tex;
@@ -2859,6 +2774,7 @@ Option_Response_Problem_Parts.tex;
 Option_Response_Problems.tex;
 Option_Response_Simple.tex;
 Other_Symbols.tex;
+Parameter_encrypturl.tex;
 Parameter_Helper.tex;
 Parameter_Manager.tex;
 Parameter_Overview.tex;
@@ -2876,12 +2792,15 @@ Portfolio_FileList.tex;
 Portfolio_OpenFile.tex;
 Portfolio_RenameFile.tex;
 Portfolio_ShareFile_ChangeSetting.tex;
+Portfolio_ShareFile_Conditional.tex;
 Portfolio_ShareFile_SetAccess.tex;
 Portfolio_ShareFile_StopAccess.tex;
 Portfolio_ShareFile.tex;
 Prefs_About_Me.tex;
 Prefs_Forwarding.tex;
 Prefs_Language.tex;
+Prefs_Messages.tex;
+Prefs_Notification.tex;
 Prefs_Screen_Name_Nickname.tex;
 Print_Library.tex;
 Print_Options.tex;
@@ -2935,6 +2854,7 @@ Slot_ResourceParameter.tex;
 Slot_RestrictAvailibility.tex;
 Slot_SelectingField.tex;
 Slot_SpecifyProctors.tex;
+Some_Items_Were_Not_Submitted.tex;
 Spreadsheet_About.tex;
 Spreadsheet_Calculation.tex;
 Spreadsheet_Calculation_Time.tex;
@@ -3006,7 +2926,40 @@ German Tex files for the help system
 <filenames>
 About_Bombs.tex;
 About_Communication.tex;
+Authoring_Math_Editor.tex;
+Contextual_Help.tex;
+Cascading_Parameters.tex;
+Course_Self_Enrollment.tex;
+Docs_About_Bulletin_Board.tex;
+Docs_About_Group_Files.tex;
+Docs_About_My_Personal_Info.tex;
+Docs_About_Simple_Page.tex;
+Docs_About_Syllabus.tex;
+Docs_Adding_Course_Doc.tex;
+Docs_Adding_Folders.tex;
+Docs_Editing_Templated_Pages.tex;
+Docs_Navigate_Content.tex;
+Docs_Score_Upload_Form.tex;
+Docs_Verify_Content.tex;
+Formula_Editor.tex;
+General_Intro.tex;
+Generation.tex;
+Metadata_Description.tex;
+Navigation_Screen.tex;
+Parameter_Overview.tex;
+Problem_Parameters.tex;
+Publishing_Copyright.tex;
+Publishing_Keywords.tex;
+Quick_Grades_Possibly_Correct.tex;
+Ranking_Problems.tex;
+Search_Advanced.tex;
+Search_Basic.tex;
+Student_Intro.tex;
+Syllabus_ExtLink.tex;
+Table_Mode.tex;
 Tries.tex;
+Uploaded_Templates_PublicView.tex;
+Uploaded_Templates_TextBoxes.tex;
 </filenames>
 </fileglob>
 <fileglob>
@@ -3486,6 +3439,24 @@ them roles.
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/lonuserutils.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonuserutils.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Common routines for user management including upload of lists of users in different formats, and to automatically create users (if they do not exist already), assign them roles within the privileges of the uploader to create/edit users. Also the ability to generate filtered lists of users with specific roles, as determined by the privileges of the viewer.   
+</description>
+<status>works/unverified</status>
+</file>
+<file>
+<source>loncom/interface/selfenroll.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/selfenroll.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Users with accounts in LON-CAPA can self-enroll in courses between specified start and end dates, if the course has been configured to allow it, and the user's domain/institutional type satisfy the settings for self-enrollment in the course.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/interface/lonhtmlcommon.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonhtmlcommon.pm</target>
 <categoryname>handler</categoryname>
@@ -3668,7 +3639,23 @@ COPYRIGHT.txt;
 JmolApplet.jar;
 Jmol.js;
 LICENSE.txt;
-README.txt
+README.txt;
+JmolApplet0_Core.jar;
+JmolApplet0_i18n.jar;
+JmolApplet0.jar;
+JmolApplet0_Jars.jar;
+JmolApplet0_Jvxl.jar;
+JmolApplet0_Main.jar;
+JmolApplet0_Popup.jar;
+JmolApplet0_Quantum.jar;
+JmolApplet0_ReadersCifPdb.jar;
+JmolApplet0_ReadersMolXyz.jar;
+JmolApplet0_ReadersMore.jar;
+JmolApplet0_ReadersXml.jar;
+JmolApplet0_ShapeBio.jar;
+JmolApplet0_ShapeSpecial.jar;
+JmolApplet0_Smiles.jar;
+JmolApplet0_Viewer.jar;
   </filenames>
 </fileglob>
 
@@ -3680,7 +3667,104 @@ README.txt
     Dynamically converts JME strings into either a png or ps file.
   </description>
 </file>
-
+<fileglob>
+  <glob>*.*</glob>
+  <sourcedir>loncom/html/adm/dragmath/applet/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+Dragmath is a Java-based formula editor
+  </description>
+  <filenames>
+Latex.html;
+MathML.html;
+Maxima.html;
+MaximaPopup.html;
+EditMathPopup.html;
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.*</glob>
+  <sourcedir>loncom/html/adm/dragmath/applet/classes/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+Dragmath is a Java-based formula editor
+  </description>
+  <filenames>
+AbsoluteLayout.jar;
+jep.jar;
+Project.jar;
+Config.xml;
+jdom.jar;
+swing-layout-1.0.jar;
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.*</glob>
+  <sourcedir>loncom/html/adm/dragmath/applet/HotEqn/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/HotEqn/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+Dragmath is a Java-based formula editor
+  </description>
+  <filenames>
+HotEqn.class;
+HotEqn.jar;
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.*</glob>
+  <sourcedir>loncom/html/adm/dragmath/applet/classes/Display/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes/Display/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+Dragmath is a Java-based formula editor
+  </description>
+  <filenames>
+MainApplet.class;
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.*</glob>
+  <sourcedir>loncom/html/adm/dragmath/applet/classes/formats/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes/formats/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+Dragmath is a Java-based formula editor
+  </description>
+  <filenames>
+ASCIIMathML.xml;
+Latex.xml;
+MathML.xml;
+MoodleTex.xml;
+Maple.xml;
+Maxima.xml;
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.*</glob>
+  <sourcedir>loncom/html/adm/dragmath/applet/classes/lang/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes/lang/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+Dragmath is a Java-based formula editor
+  </description>
+  <filenames>
+ca.xml;
+cz.xml;
+en.xml;
+fr.xml;
+no.xml;
+pt-br.xml;
+sv.xml;
+de.xml;
+es.xml;
+nl.xml;
+pl.xml;
+ru.xml;
+  </filenames>
+</fileglob>
 <fileglob>
   <glob>*.*</glob>
   <sourcedir>loncom/html/adm/jsMath/</sourcedir>
@@ -3718,7 +3802,7 @@ jsMath-old-browsers.js;
   <target dist='default'>home/httpd/html/adm/jsMath/fonts/</target>
   <categoryname>script</categoryname>
   <description>
-    Dynamically converts JME strings into either a png or ps file.
+    Server side png fonts for use by jsMath
   </description>
   <installscript>
 commands /home/httpd/html/adm
@@ -3729,6 +3813,24 @@ loncom/html/adm/jsMath/jsMath-fonts-1.3.
   </dependencies>
 </file>
 
+<file>
+  <source>loncom/html/adm/fckeditor/FCKeditor_2.4.3.tar.gz</source>
+  <target dist='default'>home/httpd/html/adm/fckeditor</target>
+  <categoryname>script</categoryname>
+  <description>
+   GUI HTML Editor, scripted installation decompress the tarball and
+   installs the loncapa config.js file
+  </description>
+  <installscript>
+commands /home/httpd/html/
+  </installscript>
+  <dependencies>
+loncom/html/adm/fckeditor/commands;
+loncom/html/adm/fckeditor/FCKeditor_2.4.3.tar.gz;
+loncom/html/adm/fckeditor/loncapaconfig.js;
+  </dependencies>
+</file>
+
 <fileglob>
   <glob>*.*</glob>
   <sourcedir>loncom/html/adm/jsMath/extensions/</sourcedir>
@@ -3738,6 +3840,7 @@ loncom/html/adm/jsMath/jsMath-fonts-1.3.
 Additional jsMath functionality that can be used when needed.
   </description>
   <filenames>
+AMSmath.js;
 AMSsymbols.js;
 HTML.js;
 bbox.js;
@@ -3770,6 +3873,7 @@ mimeTeX.js;
 noCache.js;
 noGlobal.js;
 noImageFonts.js;
+smallFonts.js;
 spriteImageFonts.js;
 tex2math.js;
   </filenames>
@@ -3985,6 +4089,14 @@ Handles the production of printable file
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/entities.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/entities.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Converts html/xml entities to latex.
+</description>
+</file>
+<file>
   <source>loncom/metadata_database/LONCAPA/lonmetadata.pm</source>
   <target dist='default'>home/httpd/lib/perl/LONCAPA/lonmetadata.pm</target>
   <categoryname>system file</categoryname>
@@ -4051,17 +4163,6 @@ Allows users with "mky" privileges to ge
 <status>works/unverified</status>
 </file>
 <file>
-<source>loncom/interface/londropadd.pm</source>
-<target dist='default'>home/httpd/lib/perl/Apache/londropadd.pm</target>
-<categoryname>handler</categoryname>
-<description>
-Allows course coordinators to upload courselists in different formats, and
-automatically create users (if they do not exist already), assign them the
-role of student in a course, and add them to the classlist.
-</description>
-<status>works/unverified</status>
-</file>
-<file>
 <source>loncom/interface/lonviewclasslist.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonviewclasslist.pm</target>
 <categoryname>handler</categoryname>
@@ -4909,6 +5010,13 @@ loncom/build/pod2html.sh ../auth/loncacc
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/auth/lonipcheck.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonipcheck.pm</target>
+<categoryname>handler</categoryname>
+<description>Checks IP-based access control settings - disable subsequent PerlHandlers if client's IP is blocked</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/auth/londatecheck.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/londatecheck.pm</target>
 <categoryname>handler</categoryname>
@@ -5147,7 +5255,7 @@ Domain information serving.
 <file>
 <source>loncom/mime.types</source>
 <target dist='default'>etc/httpd/conf/mime.types</target>
-<target dist='sles10 suse10.1 suse10.2'>etc/apache2/mime.types</target>
+<target dist='sles10 suse10.1 suse10.2 suse10.3'>etc/apache2/mime.types</target>
 <categoryname>www static conf</categoryname>
 <description>Expanded mime.types</description>
 </file>
@@ -5518,6 +5626,7 @@ srvempty.gif;
 srvgood.gif;
 srvhalf.gif;
 srvnull.gif;
+stift.gif;
 survey.gif;
 survey_big.gif;
 task.gif;
@@ -5734,7 +5843,9 @@ modules/TexConvert/tthperl/commands
 <dependencies>
 commands;
 compiles/tth.so.i386;
-compiles/tth.so.x86_64
+compiles/tth.so.x86_64;
+compiles/tth.so.i386.fedora9;
+compiles/tth.so.x86_64.fedora9;
 </dependencies>
 </file>
 <file>
@@ -5822,6 +5933,7 @@ loncom/cgi/mimeTeX/commands
 commands;
 gfuntype.c;
 gifsave.c;
+loncapanewcommands.h;
 mimetex.c;
 mimetex.h;
 mimetex.html;
@@ -6215,6 +6327,7 @@ bl_step8.gif;
 bl_step9.gif;
 brws.gif;
 catalog.gif;
+ccat.gif;
 ccrs.gif;
 chat.gif;
 chrt.gif;
@@ -6288,6 +6401,7 @@ vbkm.gif;
 <filenames>
 anno.png;
 bchat.png;
+ccat.png;
 ccrs.png;
 clst.png;
 conf.png;
@@ -6650,7 +6764,7 @@ file that allows setuid password privile
 <file>
 <source>loncom/init.d/loncontrol</source>
 <target dist='default'>etc/rc.d/init.d/loncontrol</target>
-<target dist='suse9.2 suse9.3 sles9 sles10 suse10.1 suse10.2'>etc/init.d/loncontrol</target>
+<target dist='suse9.2 suse9.3 sles9 sles10 suse10.1 suse10.2 suse10.3'>etc/init.d/loncontrol</target>
 <categoryname>root script</categoryname>
 <description>
 Controls the launching/halting of lonc, lond, and lonsql processes.
@@ -6658,7 +6772,7 @@ Controls the launching/halting of lonc,
 </file>
 <link>
 <linkto dist='default'>etc/rc.d/init.d/loncontrol</linkto>
-<linkto dist='suse9.2 suse9.3 sles9 sles10 suse10.1 suse10.2'>etc/init.d/loncontrol</linkto>
+<linkto dist='suse9.2 suse9.3 sles9 sles10 suse10.1 suse10.2 suse10.3'>etc/init.d/loncontrol</linkto>
 <target dist='default'>
 etc/rc.d/rc0.d/K05loncontrol;
 etc/rc.d/rc1.d/K05loncontrol;
@@ -6668,19 +6782,19 @@ etc/rc.d/rc4.d/S95loncontrol;
 etc/rc.d/rc5.d/S95loncontrol;
 etc/rc.d/rc6.d/K05loncontrol
 </target>
-<target dist='suse10.2'></target>
+<target dist='suse10.2 suse10.3'></target>
 <categoryname>symbolic link</categoryname>
 <description>
 symbolic links to /etc/rc.d/init.d/loncontrol for run-levels</description>
 </link>
 
-<file dist="suse10.2">
+<file dist="suse10.2 suse10.3">
   <source>loncom/init.d/loncontrol</source>
   <target>etc/rc.d/</target>
   <description>
     setup loncontrol to run at boot
   </description>
-  <installscript dist="suse10.2">
+  <installscript dist="suse10.2 suse10.3">
 -c 'chkconfig --del loncontrol;chkconfig loncontrol 345;chkconfig --list loncontrol'
   </installscript>
   <dependencies>
@@ -6689,6 +6803,26 @@ loncom/init.d/loncontrol
 </file>
 
 <file>
+  <source>doc/latex/utf8.def</source>
+  <target dist='default'>usr/local/loncapa/doc/utf8.def</target>
+  <target dist='rhes4'>usr/share/texmf/tex/latex/base/utf8.def</target>
+  <categoryname>system file</categoryname>
+  <description>
+   utf8 definitions for LaTeX
+  </description>
+</file>
+
+<file>
+  <source>doc/latex/utf8enc.dfu</source>
+  <target dist='default'>usr/local/loncapa/doc/utf8enc.dfu</target>
+  <target dist='rhes4'>usr/share/texmf/tex/latex/base/utf8enc.dfu</target>
+  <categoryname>system file</categoryname>
+  <description>
+   utf8 declarations for LaTeX
+  </description>
+</file>
+
+<file>
 <source>loncom/atalk/config</source>
 <target dist='default'>usr/local/loncapa/doc/conf_examples/config</target>
 <categoryname>static conf</categoryname>
@@ -6763,6 +6897,14 @@ of users, and (b) to display e-mail of t
   </description>
 </file>
 <file>
+  <source>loncom/interface/createaccount.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/createaccount.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+    An e-mail address can be used to create a LON-CAPA account via a two-step process employing a token sent to the e-mail address (the address will be the username). Alternatively, an institutional login can be used (after successful authentication) to create a corresponding LON-CAPA account, if one is missing.
+  </description>
+</file>
+<file>
   <source>loncom/interface/lonmodifycourse.pm</source>
   <target dist='default'>home/httpd/lib/perl/Apache/lonmodifycourse.pm</target>
   <categoryname>handler</categoryname>