--- doc/loncapafiles/loncapafiles.lpml	2009/09/17 02:28:26	1.614.4.1
+++ doc/loncapafiles/loncapafiles.lpml	2009/05/08 18:31:29	1.644
@@ -2,7 +2,7 @@
  "http://lpml.sourceforge.net/DTD/lpml.dtd">
 <!-- loncapafiles.lpml -->
 
-<!-- $Id: loncapafiles.lpml,v 1.614.4.1 2009/09/17 02:28:26 raeburn Exp $ -->
+<!-- $Id: loncapafiles.lpml,v 1.644 2009/05/08 18:31:29 raeburn Exp $ -->
 
 <!--
 
@@ -1057,7 +1057,7 @@ utility cgi script to view status of per
   <target dist='default'>home/httpd/lib/perl/LONCAPA/lonauthcgi.pm</target>
   <categoryname>system file</categoryname>
   <description>
-      Provides routines used in authorization of server status CGI scripts
+      Provides routines used in authorization of server status CGI scripts 
   </description>
 </file>
 <file>
@@ -1262,6 +1262,8 @@ Plot_curve.problem;
 Plot_curve.problem.meta;
 Plot_data.problem;
 Plot_data.problem.meta;
+Rnumerical.problem;
+Rnumerical.problem.meta;
 RadioResponse.problem;
 RadioResponse.problem.meta;
 RandomLabelExample.problem;
@@ -1291,6 +1293,8 @@ SimpleMatching.problem;
 SimpleMatching.problem.meta;
 SimpleMathResponse.problem;
 SimpleMathResponse.problem.meta;
+SimpleMathResponseR.problem;
+SimpleMathResponseR.problem.meta;
 SimpleRank.problem;
 SimpleRank.problem.meta;
 SimpleTrueFalse.problem;
@@ -1543,6 +1547,14 @@ small script to handle the start up of t
   </description>
 </file>
 <file>
+  <source>loncom/lonr</source>
+  <target dist='default'>home/httpd/perl/lonr</target>
+  <categoryname>script</categoryname>
+  <description>
+    manages the existance and talking to the R processes
+  </description>
+</file>
+<file>
     <source>loncom/request_ssl_key.sh</source>
     <target dist='default'>home/httpd/lonCerts/request_ssl_key.sh</target>
     <categoryname>script</categoryname>
@@ -1695,6 +1707,16 @@ user passwords.
 <status>being updated</status>
 </file>
 <file>
+<source>loncom/lcinstallfile</source>
+<target dist='default'>home/httpd/perl/lcinstallfile</target>
+<categoryname>setuid script</categoryname>
+<description>
+Set uid file that allows lond to install files in 
+lonTab which is normally owned by root.
+</description>
+<status>under construction</status>
+</file>
+<file>
 <source>loncom/pwchange</source>
 <target dist='default'>home/httpd/perl/pwchange</target>
 <categoryname>setuid script</categoryname>
@@ -2327,6 +2349,15 @@ The PDF Domain Manual
     Examples for using &EXT problem metadata
   </description>
 </file>
+<file>
+  <source>loncom/interface/lontemplate.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lontemplate.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+    Handler to create templates
+  </description>
+  <status>works/unverified</status>
+</file>
 <fileglob>
 <glob>*.*</glob>
 <sourcedir>loncom/html/adm/help/gif/</sourcedir>
@@ -3517,6 +3548,7 @@ fa.pm;
 ar.pm;
 es.pm;
 x_chef.pm;
+zh.pm;
 </filenames>
 </fileglob>
 <file>
@@ -4234,6 +4266,14 @@ The handler displays messages, has routi
   <status>works/unverified</status>
 </file>
 <file>
+  <source>loncom/interface/courseprefs.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/courseprefs.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+    Interface for displaying/modifying course configuration
+  </description>
+</file>
+<file>
 <source>loncom/homework/hint.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/hint.pm</target>
 <categoryname>handler</categoryname>
@@ -4639,6 +4679,15 @@ Tags Default Definition Module
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/xml/lontable.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lontable.pm</target>
+<categoryname>server standard</categoryname>
+<description>
+Table object
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/xml/run.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/run.pm</target>
 <categoryname>handler</categoryname>
@@ -4781,6 +4830,15 @@ handles request to the CAPA homework pro
   <status>works/unverified</status>
 </file>
 <file>
+  <source>loncom/homework/lonr.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonr.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+    routines to simplify talking to the R client
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
 <source>loncom/xml/Safe.pm</source>
 <target dist='default'>home/httpd/lib/perl/Safe.pm</target>
 <categoryname>handler</categoryname>
@@ -5369,6 +5427,14 @@ A blank page with very minimal HTML stru
 A blank page which calls drawwindow in its opener after being loaded.
 </description>
 </file>
+<file>
+<source>loncom/includepsheader.ps</source>
+<target dist='default'>home/httpd/lib/includepsheader.ps</target>
+<categoryname>interface file</categoryname>
+<description>
+Extra header for dvips
+</description>
+</file>
 <fileglob>
 <glob>*.gif</glob>
 <sourcedir>rat/images/</sourcedir>
@@ -5518,13 +5584,18 @@ logos and general widget icons
 <filenames>
 SMETE_white.gif;
 aboutlon.gif;
-aboutlon_pt.gif;
 aboutlon_de.gif;
+aboutlon_pt.gif;
 accessbutton.gif;
-accessbutton_pt.gif;
 accessbutton_de.gif;
+accessbutton_pt.gif;
 angry.gif;
+arrow.closed.gif;
+arrow.open.gif;
+arrow.up.gif;
 arrow_up.gif;
+arrow_white.png;
+avi.gif;
 baeh.gif;
 bigsmile.gif;
 branch.gif;
@@ -5571,10 +5642,12 @@ html_big.gif;
 huh.gif;
 jar.gif;
 jar_big.gif;
+jpeg.gif;
 jpg.gif;
 jpg_big.gif;
 latex.gif;
 library.gif;
+lightGreyBG.png;
 lipsrsealed.gif;
 lite.gif;
 liteani.gif;
@@ -5587,6 +5660,7 @@ lonhelplogos.gif;
 lonhelptop.gif;
 lonlogo.gif;
 lonlogos.gif;
+lonUtilityIcon.png;
 lowerleft.gif;
 lowerright.gif;
 mailbkgrd.gif;
@@ -5598,6 +5672,8 @@ mov.gif;
 mov_big.gif;
 move_up.gif;
 move_down.gif;
+mpeg.gif;
+mpg.gif;
 navmap.correct.gif;
 navmap.partial.gif;
 navmap.ellipsis.gif;
@@ -5625,6 +5701,9 @@ problem_big.gif;
 ps.gif;
 ps_big.gif;
 rolleyes.gif;
+qt.gif;
+qti.gif;
+qtm.gif;
 quill.gif;
 quiz.gif;
 quiz_big.gif;
@@ -5635,6 +5714,7 @@ server.gif;
 server_big.gif;
 shocked.gif;
 smiley.gif;
+spreadsheet.gif;
 srvbad.gif;
 srvempty.gif;
 srvgood.gif;
@@ -5648,6 +5728,7 @@ task_big.gif;
 tex.gif;
 tex_big.gif;
 tth.gif;
+text.gif;
 txt.gif;
 txt_big.gif;
 unknown.gif;
@@ -5662,6 +5743,7 @@ userauthentication_de.gif;
 wav.gif;
 wav_big.gif;
 white_space_20_22.gif;
+whitespace_21.gif;
 whitespace1.gif;
 whitespace10.gif;
 whitespace2.gif;
@@ -5673,6 +5755,7 @@ whitespace7.gif;
 whitespace8.gif;
 whitespace9.gif;
 wink.gif;
+wmv.gif;
 xls.gif;
 xls_big.gif;
 xml.gif;
@@ -6347,6 +6430,8 @@ ccat.gif;
 ccrs.gif;
 chat.gif;
 chrt.gif;
+close-all-folders.gif;
+close-navigation.gif;
 clst.gif;
 com.gif;
 conf.gif;
@@ -6377,12 +6462,15 @@ ledsend.gif;
 list.gif;
 logout.gif;
 mail.gif;
+mark-discussionentries-read.gif;
 mcrs.gif;
 mrk.gif;
 nav.gif;
 new.gif;
 next.gif;
 nothumb.gif;
+open-all-folders.gif;
+open-first-problem.gif;
 parm.gif;
 pcstr.gif;
 pgrd.gif;
@@ -6392,17 +6480,22 @@ pref.gif;
 prt.gif;
 pub.gif;
 qempty.gif;
+rcrs.gif;
 reload.gif;
 remotebg.gif;
 res.gif;
 roles.gif;
+rsrv.gif;
 rtrv.gif;
 sbkm.gif;
 sctr.gif;
+show-all.gif;
+show-incomplete-problems.gif;
 spacer.gif;
 sprs.gif;
 src.gif;
 srvr.gif;
+start-navigation.gif;
 stat.gif;
 subm.gif;
 title.gif;
@@ -6448,6 +6541,8 @@ mcrs.png;
 parm.png;
 port.png;
 prt.png;
+rcrs.png;
+rsrv.png;
 sbkm.png;
 src.png;
 srvr.png;
@@ -6469,6 +6564,52 @@ sctr.png;
 stat.png;
 </filenames>
 </fileglob>
+<fileglob>
+<glob>*.png</glob>
+<sourcedir>loncom/html/res/adm/pages/</sourcedir>
+<targetdir dist='default'>home/httpd/html/res/adm/pages/</targetdir>
+<categoryname>graphic file</categoryname>
+<description>graphical icons used in submenus</description>
+<filenames>
+addClickerInfoFile.png;
+comblock.png;
+contact-new.png;
+coprplot.png;
+dialog-information.png;
+document-open.png;
+document-properties.png;
+edit-copy.png;
+edit-find.png;
+edit-find-replace.png;
+edit-redo.png;
+edit-select-all.png;
+edit-undo.png;
+emblem-photos.png;
+emblem-readonly.png;
+emblem-system.png;
+folder-new.png;
+format-justify-fill.png;
+fromfile.png;
+list-add.png;
+mail-message-new.png;
+mail-reply-all.png;
+mail-reply-sender.png;
+messalog.png;
+network-wireless.png;
+network-workgroup.png;
+uploadscores.png;
+preferences-desktop-font.png;
+preferences-desktop-locale.png;
+preferences-desktop-remote-desktop.png;
+preferences-desktop-theme.png;
+preferences-desktop-wallpaper.png;
+preferences-system-windows.png;
+start-here.png;
+subtimpl.png;
+system-lock-screen.png;
+system-users.png;
+</filenames>
+</fileglob>
 <file>
 <source>loncom/html/res/adm/pages/math_example.tex</source>
 <target dist='default'>home/httpd/html/res/adm/pages/math_example.tex</target>
@@ -6940,7 +7081,7 @@ of users, and (b) to display e-mail of t
     Interface for modifying domain configuration
   </description>
 </file>
- <file>
+<file>
   <source>loncom/interface/domainstatus.pm</source>
   <target dist='default'>home/httpd/lib/perl/Apache/domainstatus.pm</target>
   <categoryname>handler</categoryname>
@@ -6949,6 +7090,23 @@ of users, and (b) to display e-mail of t
   </description>
 </file>
 <file>
+  <source>loncom/interface/lonconfigsettings.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonconfigsettings.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+   Common routines for generating menus to set default configuration settings -  
+   for a domain or for a course.
+  </description>
+</file>
+<file>
+  <source>loncom/interface/lonpdfupload.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonpdfupload.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+   Interface to upload a PDF form containing responses to problems entered offline using a PDF reader for storage as submissions.
+  </description>
+</file>
+<file>
   <source>loncom/interface/lonpopulate.pm</source>
   <target dist='default'>home/httpd/lib/perl/Apache/lonpopulate.pm</target>
   <categoryname>handler</categoryname>
@@ -7049,6 +7207,7 @@ modify_config_files.pl;
 parse_scantron.pl;
 seed_accesscount.pl;
 stress.pl;
+testkerberos.pl;
 unescape.pl;
 user_login_count.pl;
 </filenames>