--- doc/loncapafiles/loncapafiles.lpml	2011/05/25 01:35:52	1.675.4.32
+++ doc/loncapafiles/loncapafiles.lpml	2012/08/27 10:55:45	1.797.2.16
@@ -2,7 +2,7 @@
  "http://lpml.sourceforge.net/DTD/lpml.dtd">
 <!-- loncapafiles.lpml -->
 
-<!-- $Id: loncapafiles.lpml,v 1.675.4.32 2011/05/25 01:35:52 raeburn Exp $ -->
+<!-- $Id: loncapafiles.lpml,v 1.797.2.16 2012/08/27 10:55:45 raeburn Exp $ -->
 
 <!--
 
@@ -122,6 +122,14 @@ http://www.lon-capa.org/
   <chmod dist='default'>0400</chmod><chown dist='default'>www:www</chown>
   <abbreviation>graphicfile</abbreviation>
 </category>
+<category name="lexicon file" type="runtime">
+  <chmod dist='default'>0444</chmod><chown dist='default'>www:www</chown>
+  <abbreviation>lexicon</abbreviation>
+</category>
+<category name="lexicon file" type="development">
+  <chmod dist='default'>0444</chmod><chown dist='default'>www:www</chown>
+  <abbreviation>lexicon</abbreviation>
+</category>
 <category name="doc" type="runtime">
   <chmod dist='default'>0644</chmod><chown dist='default'>root:root</chown>
   <abbreviation>systemfile</abbreviation>
@@ -186,6 +194,14 @@ http://www.lon-capa.org/
   <chmod dist='default'>0700</chmod><chown dist='default'>www:www</chown>
   <abbreviation>directory</abbreviation>
 </category>
+<category name="pdf manual" type="runtime">
+  <chmod dist='default'>0444</chmod><chown dist='default'>www:www</chown>
+  <abbreviation>manual</abbreviation>
+</category>
+<category name="pdf manual" type="development">
+  <chmod dist='default'>0644</chmod><chown dist='default'>www:www</chown>
+  <abbreviation>manual</abbreviation>
+</category>
 </categories>
 <rpm>
   <rpmSummary>Basic files for running a LON-CAPA server.</rpmSummary>
@@ -242,10 +258,22 @@ echo '**********************************
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/httpd/conf</targetdir>
+  <targetdir dist='suse9.2 suse9.3 sles9'>etc/httpd</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/apache2</targetdir>
   <categoryname>standard</categoryname>
   <description>web configuration files</description>
 </directory>
 <directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>etc/httpd/conf/rewrites</targetdir>
+  <targetdir dist='suse9.2 suse9.3 sles9'>etc/httpd/rewrites</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/apache2/rewrites</targetdir>
+  <categoryname>standard</categoryname>
+  <description>
+  default configuration files to enable/disable http:// -> https:// rewrites
+  </description>
+</directory>
+<directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/pam.d</targetdir>
   <categoryname>standard</categoryname>
@@ -255,56 +283,56 @@ echo '**********************************
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/init.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4'>etc/init.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/init.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run during system startup</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc0.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4'>etc/rc0.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc0.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 0</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc1.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4'>etc/rc1.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc1.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 1</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc2.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4'>etc/rc2.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc2.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 2</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc3.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4'>etc/rc3.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc3.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 3</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc4.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4'>etc/rc4.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc4.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 4</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc5.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4'>etc/rc5.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc5.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 5</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc6.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4'>etc/rc6.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc6.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 6</description>
 </directory>
@@ -389,6 +417,18 @@ Used by lond parent to check if children
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/webdav</targetdir>
+  <categoryname>server standard</categoryname>
+  <description>for storage of webdav DAVLock files</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/webdav/sessionIDs</targetdir>
+  <categoryname>server standard</categoryname>
+  <description>for storage of webdav session files</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/lib</targetdir>
   <categoryname>server readonly</categoryname>
   <description>location of LON-CAPA software modules and
@@ -471,6 +511,12 @@ extensions</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/html/priv</targetdir>
+  <categoryname>server standard</categoryname>
+  <description>root of hosted authors' construction spaces tree</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/html/res</targetdir>
   <categoryname>server standard</categoryname>
   <description>root of resource tree</description>
@@ -525,6 +571,12 @@ extensions</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/html/adm/MathJax</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>MathJax files</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/html/adm/jsMath</targetdir>
   <categoryname>server readonly</categoryname>
   <description>jsMath support files</description>
@@ -579,30 +631,64 @@ extensions</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/jQuery/css/ui-lightness</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/jQuery/css/smoothness</targetdir>
   <categoryname>server readonly</categoryname>
   <description>jQuery JavaScript library -- css files</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/jQuery/css/ui-lightness/images</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/jQuery/css/smoothness/images</targetdir>
   <categoryname>server readonly</categoryname>
   <description>jQuery JavaScript library -- css images</description>
 </directory>
+
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/jQuery/css/smoothness</targetdir>
+  <targetdir dist='default'>/home/httpd/html/adm/jpicker</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>jQuery JavaScript library -- css files</description>
+  <description>JQuery color picker JavaScript library</description>
+</directory>
+<directory dist='default'>
+  <protetionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>/home/httpd/html/adm/jpicker/js</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>JQuery color picker JavaScript library javascript files</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/jQuery/css/smoothness/images</targetdir>
+  <targetdir dist='default'>/home/httpd/html/adm/jpicker/css</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>jQuery JavaScript library -- css images</description>
+  <description>JQuery color picker JavaScript library CSS files</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>/home/httpd/html/adm/jpicker/images</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>Jquery color picker javascript library image files</description>
+</directory>
+
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>/home/httpd/html/adm/countdown</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>JQuery countdown timer</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>/home/httpd/html/adm/countdown/js</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>JQuery countdown timer</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>/home/httpd/html/adm/countdown/css</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>JQuery countdown timer</description>
+</directory>
+  
+
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/html/adm/dragmath/applet</targetdir>
   <categoryname>server readonly</categoryname>
   <description>Formula editor applet directory and popups</description>
@@ -821,13 +907,6 @@ are viewable over the world-wide web</de
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/res/adm/pages/bookmarkmenu
-  </targetdir>
-  <categoryname>server readonly</categoryname>
-  <description>bookmark user interface code</description>
-</directory>
-<directory dist='default'>
-  <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/html/res/adm/pages/annotations
   </targetdir>
   <categoryname>server readonly</categoryname>
@@ -928,7 +1007,7 @@ each list element consists of only two s
 <file>
 <source>loncom/loncapa.conf</source>
 <target dist='default'>etc/httpd/conf/loncapa.conf</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/loncapa.conf</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/loncapa.conf</target>
 <categoryname>conf</categoryname>
 <description>
 <p>
@@ -968,10 +1047,10 @@ MySQL database</td></tr>
 </table>
 </note>
 </file>
-<file>
+<file type="postaboutversion">
 <source>loncom/loncapa_apache.conf</source>
 <target dist='default'>etc/httpd/conf/loncapa_apache.conf</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/loncapa_apache.conf</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/loncapa_apache.conf</target>
 <categoryname>static conf</categoryname>
 <description>
 The goal of this file is to implement all LON-CAPA specific
@@ -991,7 +1070,7 @@ the www@localhost MySQL password, and br
 <file>
 <source>loncom/startup.pl</source>
 <target dist='default'>etc/httpd/conf/startup.pl</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/startup.pl</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/startup.pl</target>
 <categoryname>static conf</categoryname>
 <description>
 This file provides initializations for perl handlers.  It adjusts what
@@ -1002,7 +1081,7 @@ well as causing the Apache module to be
 </file>
 <link>
 <linkto>etc/apache2</linkto>
-<target dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>
+<target dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>
 etc/apache2/conf
 </target>
 <categoryname>symbolic link</categoryname>
@@ -1011,6 +1090,39 @@ symbolic link to directory /etc/apache2
 </description>
 </link>
 <file>
+<source>loncom/rewrites/loncapa_rewrite_off.conf</source>
+<target dist='default'>etc/httpd/conf/loncapa_rewrite.conf</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/loncapa_rewrite.conf</target>
+<categoryname>conf</categoryname>
+<description>
+Default rewrite file. 
+Default is to disable rewriting of external requests for http:// to https:// 
+by setting: RewriteEngine off
+</description>
+</file>
+<file>
+<source>loncom/rewrites/loncapa_rewrite_on.conf</source>
+<target dist='default'>etc/httpd/conf/rewrites/loncapa_rewrite_on.conf</target>
+<target dist='sles9'>etc/apache/rewrites/loncapa_rewrite_on.conf</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/rewrites/loncapa_rewrite_on.conf</target>
+<categoryname>static conf</categoryname>
+<description>
+File to copy to /etc/apache2/loncapa_rewrite.conf (SuSE/SLES/Debian/Ubuntu LTS) or to  /etc/httpd/conf/loncapa_rewrite.conf to enable rewriting of
+external requests for http:// to https:// 
+</description>
+</file>
+<file>
+<source>loncom/rewrites/loncapa_rewrite_off.conf</source>
+<target dist='default'>etc/httpd/conf/rewrites/loncapa_rewrite_off.conf</target>
+<target dist='sles9'>etc/apache/rewrites/loncapa_rewrite_off.conf</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/rewrites/loncapa_rewrite_off.conf</target>
+<categoryname>static conf</categoryname>
+<description>
+File to copy to /etc/apache2/loncapa_rewrite.conf (SuSE/SLES/Debian/Ubuntu LTS) or to  /etc/httpd/conf/loncapa_rewrite.conf to disable rewriting of
+external requests for http:// to https:// 
+</description>
+</file>
+<file>
 <source>loncom/thesaurus/thesaurus.db</source>
 <target dist='default'>home/httpd/lonTabs/thesaurus.db</target>
 <categoryname>system file</categoryname>
@@ -1132,6 +1244,14 @@ utility cgi script to view status of per
   </description>
 </file>
 <file>
+  <source>loncom/lonmap.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonmap.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+      Provides a module to read course files into hashes.
+  </description>
+</file>
+<file>
   <source>loncom/cgi/lonauthcgi.pm</source>
   <target dist='default'>home/httpd/lib/perl/LONCAPA/lonauthcgi.pm</target>
   <categoryname>system file</categoryname>
@@ -1328,16 +1448,28 @@ optional_criteria.task;
 optional_criteria.task.meta;
 ClickImageExample.problem;
 ClickImageExample.problem.meta;
+custom_equation.problem;
+custom_equation.problem.meta;
 customhints.problem;
 customhints.problem.meta;
 custompartial.problem;
 custompartial.problem.meta;
 CustomResponse.problem;
 CustomResponse.problem.meta;
+customunit.problem;
+customunit.problem.meta;
 Essay.problem;
 Essay.problem.meta;
 examupload.problem;
 examupload.problem.meta;
+functionplotone.problem;
+functionplotone.problem.meta;
+functionplottwo.problem;
+functionplottwo.problem.meta;
+functionplotback.problem;
+functionplotback.problem.meta;
+functionplotvector.problem;
+functionplotvector.problem.meta;
 HintFormula.problem;
 HintFormula.problem.meta;
 HintMathResponse.problem;
@@ -1346,6 +1478,8 @@ man1.jpg;
 man1.jpg.meta;
 numerical.problem;
 numerical.problem.meta;
+numPrePro.problem;
+numPrePro.problem.meta;
 Plot.problem.meta;
 Plot_curve.problem;
 Plot_curve.problem.meta;
@@ -1383,6 +1517,8 @@ SimpleFormulaCAS.problem;
 SimpleFormulaCAS.problem.meta;
 StringResponse.problem;
 StringResponse.problem.meta;
+stringPrePro.problem;
+stringPrePro.problem.meta;
 SimpleMatching.problem;
 SimpleMatching.problem.meta;
 SimpleMathResponse.problem;
@@ -1485,7 +1621,7 @@ List of machines allowed to pass along u
 <description>
 XML specification of LON-CAPA version required for certain parameters,
 response types and course containers. Used to determine if a course
-needs a minimum LON-CAPA version to function correctly.
+needs a minimum LON-CAPA version to function correctly.   
 </description>
 </file>
 
@@ -1644,7 +1780,7 @@ Batch script for removing files not acce
 <target dist='default'>home/httpd/perl/refresh_courseids_db.pl</target>
 <categoryname>script</categoryname>
 <description>
-Batch script for refreshing course information in aggregating GDBM
+Batch script for refreshing course information in aggregating GDBM 
 file: nohist_courseids.db found in /home/httpd/lonUsers on library servers.
 </description>
 </file>
@@ -1774,6 +1910,15 @@ loncom/build/CHECKRPMS
 <description>CGI script that shows users currently on machine</description>
 </file>
 <file>
+<source>loncom/cgi/listdomconfig.pl</source>
+<target dist='default'>home/httpd/cgi-bin/listdomconfig.pl</target>
+<categoryname>script</categoryname>
+<description>CGI script to display domain configuration as plain text.
+For use on the primary library server for a domain. Access control uses
+routines in lonauthcgi.pm
+</description>
+</file>
+<file>
 <source>loncom/homework/templates/sampleexternal.pl</source>
 <target dist='default'>home/httpd/cgi-bin/sampleexternal.pl</target>
 <categoryname>script</categoryname>
@@ -1886,25 +2031,23 @@ new user.
 <status>being updated</status>
 </file>
 <file>
-<source>loncom/lchtmldir</source>
-<target dist='default'>home/httpd/perl/lchtmldir</target>
+<source>loncom/lciptables</source>
+<target dist='default'>home/httpd/perl/lciptables</target>
 <categoryname>setuid script</categoryname>
 <description>
-Manages the file system ramifications of adding author mode to a user. 
-If necessary a public_html diretory is added, permissions and ownership are
-set according to the user's authentication mode.
+Calls iptables to update firewall settings for port used for internal
+LON-CAPA communication to receive traffic from other servers in cluster
 </description>
 <status>New file</status>
 </file>
 <file>
-<source>loncom/lciptables</source>
-<target dist='default'>home/httpd/perl/lciptables</target>
+<source>loncom/lchttpdlogs</source>
+<target dist='default'>home/httpd/perl/lchttpdlogs</target>
 <categoryname>setuid script</categoryname>
 <description>
-Calls iptables to update firewall settings for port used for internal
-LON-CAPA communication to receive traffic from other servers in cluster
+script called by loncron to tail latest web server access and error logs.
 </description>
-<status>New file</status>
+<status>works/verified</status>
 </file>
 <file>
 <source>loncom/lcuserdel</source>
@@ -1960,7 +2103,7 @@ HTTPi webserver license
 HTTPi webserver readme 
 </description>
 </file>
-<file>
+<file type="postaboutversion">
 <source>loncom/license/about.html</source>
 <target dist='default'>home/httpd/html/adm/about.html</target>
 <categoryname>interface file</categoryname>
@@ -2232,6 +2375,26 @@ Handler to pick a user from a directory
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/loncourserespicker.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/loncourserespicker.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Provides interface to select resources/folders from a course
+(e.g., for IMS export, or choosing content for exam blocking).
+</description>
+<status>works/unverified</status>
+</file>
+<file>
+<source>loncom/interface/londependencies.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/londependencies.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Provides interface for uploading, replacing and deleting files which
+are (or used to be) dependencies for an HTML page uploaded directly to a course.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/interface/lonbulletin.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonbulletin.pm</target>
 <categoryname>handler</categoryname>
@@ -2406,7 +2569,7 @@ loncom/build/help_graphics_converter.pl
 <file>
 <source>doc/help/author.manual.pdf</source>
 <target dist='default'>home/httpd/html/adm/help/author.manual.pdf</target>
-<categoryname>handler</categoryname>
+<categoryname>pdf manual</categoryname>
 <description>
 The PDF Author's Manual
 </description>
@@ -2435,7 +2598,7 @@ loncom/build/help_graphics_converter.pl
 <file>
 <source>doc/help/course.manual.pdf</source>
 <target dist='default'>home/httpd/html/adm/help/course.manual.pdf</target>
-<categoryname>interface file</categoryname>
+<categoryname>pdf manual</categoryname>
 <description>
 The PDF Course Manual
 </description>
@@ -2464,7 +2627,7 @@ loncom/build/help_graphics_converter.pl
 <file>
 <source>doc/help/domain.manual.pdf</source>
 <target dist='default'>home/httpd/html/adm/help/domain.manual.pdf</target>
-<categoryname>interface file</categoryname>
+<categoryname>pdf manual</categoryname>
 <description>
 The PDF Domain Manual
 </description>
@@ -2591,6 +2754,7 @@ extres.gif;
 fdbk.gif;
 feedback.gif;
 formulaResponse.gif;
+FPRexamples.gif;
 fromfile.gif;
 grds.gif;
 grps.gif;
@@ -2660,10 +2824,12 @@ subtimpl.gif;
 survey_rep.gif;
 syllabus.gif;
 system-users.gif;
+turning.gif;
 uploadscores.gif;
 uplusr.gif;
-vbkm.gif;
 verify.gif;
+wishlist.gif;
+wishlist-link.gif;
 iclicker.gif;
 interwrite1.gif;
 interwrite2.gif;
@@ -2736,6 +2902,7 @@ extres.eps;
 fdbk.eps;
 feedback.eps;
 formulaResponse.eps;
+FPRexamples.eps;
 fromfile.eps;
 grds.eps;
 grps.eps;
@@ -2804,10 +2971,13 @@ subtimpl.eps;
 survey_rep.eps;
 syllabus.eps;
 system-users.eps;
+turning.eps;
 uploadscores.eps;
 uplusr.eps;
 vbkm.eps;
 verify.eps;
+wishlist.eps;
+wishlist-link.eps;
 iclicker.eps;
 interwrite1.eps;
 interwrite2.eps;
@@ -2883,7 +3053,6 @@ Author_Manual_Title_Page.tex;
 Author_Numerical_and_Formula.tex;
 Author_Remote_Control.tex;
 Batch_Creation.tex;
-Bookmarks.tex;
 BridgeTask_About.tex;
 BridgeTask_Conditions.tex;
 BridgeTask_Create.tex;
@@ -2956,6 +3125,17 @@ Course_Message_Access.tex;
 Course_Modify_Student_Data.tex;
 Course_Parameter_Levels.tex;
 Course_Parameter_Table_Mode.tex;
+Course_Prefs_Bridgetasks.tex;
+Course_Prefs_Display.tex;
+Course_Prefs_Grading.tex;
+Course_Prefs_Printouts.tex;
+Course_Prefs_Classlists.tex;
+Course_Prefs_Feedback.tex;
+Course_Prefs_Language.tex;
+Course_Prefs_Spreadsheet.tex;
+Course_Prefs_Discussions.tex;
+Course_Prefs_General.tex;
+Course_Prefs_Other.tex;
 Course_Problem_Weight.tex;
 Course_Requests.tex;
 Course_Request_Access_End.tex;
@@ -3041,6 +3221,7 @@ Domain_Configuration_Quotas.tex;
 Domain_Configuration_Request_Courses.tex;
 Domain_Configuration_Scantron_Format.tex;
 Domain_Configuration_Server_Status.tex;
+Domain_Configuration_SSL.tex;
 Domain_Configuration_User_Creation.tex;
 Domain_Configuration_User_Modification.tex;
 Domain_Configuration_User_Sessions.tex;
@@ -3076,6 +3257,17 @@ Formula_Response_Limitations.tex;
 Formula_Response_Problems.tex;
 Formula_Response_Sampling.tex;
 Formula_Tolerance.tex;
+Function_Plot_Response_Background_Plot.tex;
+Function_Plot_Response_Evaluation_Rule.tex;
+Function_Plot_Response_Rule_Set.tex;
+Function_Plot_Response_Elements.tex;
+Function_Plot_Response_Question.tex;
+Function_Plot_Response_Spline.tex;
+Function_Plot_Response_Custom_Rule.tex;
+Function_Plot_Response_Object.tex;
+Function_Plot_Response_Vector.tex;
+Function_Plot_Response_Vector_Rule.tex;
+Function_Plot_Response_Vector_Sum_Rule.tex;
 General_Intro.tex;
 Generation.tex;
 Grade_All.tex;
@@ -3145,6 +3337,7 @@ Parameter_encrypturl.tex;
 Parameter_Helper.tex;
 Parameter_Manager.tex;
 Parameter_Overview.tex;
+Parameter_Set_Folder.tex;
 Part_Tag_Edit_Help.tex;
 Personal_Info_Page.tex;
 Physical_Units.tex;
@@ -3280,6 +3473,7 @@ View_Critical_Messages.tex;
 View_recent_activity.tex;
 What_Is_LON-CAPA.tex;
 Why_LON-CAPA.tex;
+Wishlist.tex;
 </filenames>
 </fileglob>
 <fileglob>
@@ -3927,7 +4121,7 @@ Localization class for Locale::Maketext
 <sourcedir>loncom/localize/localize/</sourcedir>
 <targetdir dist='default'>
 home/httpd/lib/perl/Apache/localize/</targetdir>
-<categoryname>static conf</categoryname>
+<categoryname>lexicon file</categoryname>
 <description>
 Translation files.
 </description>
@@ -4285,7 +4479,44 @@ loncom/html/adm/jsMath/jsMath-fonts-1.3.
 </file>
 
 <file>
-  <source>loncom/html/adm/ckeditor/ckeditor_3.1.tar.gz</source>
+  <source>loncom/html/adm/MathJax/mathjax-MathJax-v2.0-20-g07669ac.zip</source>
+  <target dist='default'>home/httpd/html/adm/MathJax</target>
+  <categoryname>script</categoryname>
+  <description>
+   MathJax for processing Tex, scripted installation that unzips installation file
+   in the appropriate location
+   NOTE: the commands file `mv`'s the files out of the original location provided
+   unzipping the file, making it look cleaner in the /home/.../adm/ directory
+  </description>
+  <installscript>
+commands /home/httpd/html/adm/MathJax
+  </installscript>
+  <dependencies>
+loncom/html/adm/MathJax/commands;
+loncom/html/adm/MathJax/VERSION;
+loncom/html/adm/MathJax/mathjax-MathJax-v2.0-20-g07669ac.zip;
+  </dependencies>
+</file>
+
+<file>
+  <source>loncom/html/adm/geogebra/geogebra_html5.tar.gz</source>
+  <target dist='default'>home/httpd/html/adm/geogebra/web</target>
+  <categoryname>script</categoryname>
+  <description>
+   HTML5/JavaScript Version of GeoGebra
+  </description>
+  <installscript>
+commands /home/httpd/html/adm/geogebra/web
+  </installscript>
+  <dependencies>
+loncom/html/adm/geogebra/commands;
+loncom/html/adm/geogebra/VERSION;
+loncom/html/adm/MathJax/geogebra_html5.tar.gz;
+  </dependencies>
+</file>
+
+<file>
+  <source>loncom/html/adm/ckeditor/ckeditor_3.6.2.tar.gz</source>
   <target dist='default'>home/httpd/html/adm/ckeditor</target>
   <categoryname>script</categoryname>
   <description>
@@ -4297,7 +4528,7 @@ commands /home/httpd/html/
   </installscript>
   <dependencies>
 loncom/html/adm/ckeditor/commands;
-loncom/html/adm/ckeditor/ckeditor_3.1.tar.gz;
+loncom/html/adm/ckeditor/ckeditor_3.6.2.tar.gz;
 loncom/html/adm/ckeditor/loncapaconfig.js;
   </dependencies>
 </file>
@@ -4370,93 +4601,197 @@ jsMath.js;
 </fileglob>
 
 <fileglob>
-  <glob>*.*</glob>
-  <sourcedir>loncom/html/adm/jQuery/js/</sourcedir>
-  <targetdir dist='default'>home/httpd/html/adm/jQuery/js/</targetdir>
+  <glob>*.js</glob>
+  <sourcedir>loncom/html/adm/jpicker/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/jpicker/js/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+JQuery colorpicker javascript library
+  </description>
+  <filenames>
+    jpicker-1.1.6.min.js;
+  </filenames>
+</fileglob>
+
+<fileglob>
+  <glob>*.css</glob>
+  <sourcedir>loncom/html/adm/jpicker/css/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/jpicker/css/</targetdir>
   <categoryname>interface file</categoryname>
   <description>
-jQuery custom distribution of version 1.3.2, UI version 1.7.2 -- without widgets
+JQuery colorpicker javascript library css files
   </description>
   <filenames>
-	jquery-1.3.2.min.js;
-	jquery-ui-1.7.2.custom.min.js;
+    jPicker-1.1.6.min.css;
   </filenames>
 </fileglob>
 
 <fileglob>
   <glob>*.*</glob>
-  <sourcedir>loncom/html/adm/jQuery/css/smoothness/</sourcedir>
-  <targetdir dist='default'>home/httpd/html/adm/jQuery/css/smoothness/</targetdir>
+  <sourcedir>loncom/html/adm/jpicker/images/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/jpicker/images/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+JQuery color picker javascript library image files
+  </description>
+  <filenames>
+    AlphaBar.png;
+    bar-opacity.png;
+    Bars.png;
+    map-opacity.png;
+    mappoint.gif;
+    Maps.png;
+    NoColor.png;
+    picker.gif;
+    preview-opacity.png;
+    rangearrows.gif;
+  </filenames>
+</fileglob>
+
+<fileglob>
+  <glob>*.js</glob>
+  <sourcedir>loncom/html/adm/countdown/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/countdown/js/</targetdir>
+  <categoryname>interface file </categoryname>
+  <description>
+JQuery countdown timer javascript files
+  </description>
+  <filenames>
+    jquery.countdown-ar.js;
+    jquery.countdown-bg.js;
+    jquery.countdown-bn.js;
+    jquery.countdown-ca.js;
+    jquery.countdown-cs.js;
+    jquery.countdown-da.js;
+    jquery.countdown-de.js;
+    jquery.countdown-el.js;
+    jquery.countdown-es.js;
+    jquery.countdown-et.js;
+    jquery.countdown-fa.js;
+    jquery.countdown-fi.js;
+    jquery.countdown-fr.js;
+    jquery.countdown-gl.js;
+    jquery.countdown-he.js;
+    jquery.countdown-hr.js;
+    jquery.countdown-hu.js;
+    jquery.countdown-id.js;
+    jquery.countdown-it.js;
+    jquery.countdown-ja.js;
+    jquery.countdown.js;
+    jquery.countdown-ko.js;
+    jquery.countdown-lt.js;
+    jquery.countdown-lv.js;
+    jquery.countdown.min.js;
+    jquery.countdown-ms.js;
+    jquery.countdown-my.js;
+    jquery.countdown-nb.js;
+    jquery.countdown-nl.js;
+    jquery.countdown.pack.js;
+    jquery.countdown-pl.js;
+    jquery.countdown-pt-BR.js;
+    jquery.countdown-ro.js;
+    jquery.countdown-ru.js;
+    jquery.countdown-sk.js;
+    jquery.countdown-sl.js;
+    jquery.countdown-sr.js;
+    jquery.countdown-sr-SR.js;
+    jquery.countdown-sv.js;
+    jquery.countdown-th.js;
+    jquery.countdown-tr.js;
+    jquery.countdown-uk.js;
+    jquery.countdown-vi.js;
+    jquery.countdown-zh-CN.js;
+    jquery.countdown-zh-TW.js;
+   </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.css</glob>
+  <sourcedir>loncom/html/adm/countdown/</sourcedir> 
+  <targetdir dist='default'>home/httpd/html/adm/countdown/css/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+JQuery countdown timer CSS files
+  </description>
+  <filenames>
+    jquery.countdown.css
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.gif</glob>
+  <sourcedir>loncom/html/adm/countdown/</sourcedir> 
+  <targetdir dist='default'>home/httpd/html/adm/countdown/css/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+JQuery countdown timer Image file for Glowing countdown
+  </description>
+  <filenames>
+    countdownGlowing.gif
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.png</glob>
+  <sourcedir>loncom/html/adm/countdown/</sourcedir> 
+  <targetdir dist='default'>home/httpd/html/adm/countdown/css/</targetdir>
   <categoryname>interface file</categoryname>
   <description>
-jQuery custom distribution of version 1.3.2, UI version 1.7.2 -- stylesheets
+JQuery countdown timer Image file for LED style countdown
   </description>
   <filenames>
-	jquery-ui-1.7.2.custom.css;
+    countdownLED.png
   </filenames>
 </fileglob>
 
+
+
 <fileglob>
   <glob>*.*</glob>
-  <sourcedir>loncom/html/adm/jQuery/css/smoothness/images/</sourcedir>
-  <targetdir dist='default'>home/httpd/html/adm/jQuery/css/smoothness/images/</targetdir>
+  <sourcedir>loncom/html/adm/jQuery/js/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/jQuery/js/</targetdir>
   <categoryname>interface file</categoryname>
   <description>
-jQuery custom distribution of version 1.3.2, UI version 1.7.2 -- stylesheets
+jQuery custom distribution of version 1.6.2, UI version 1.8.16
   </description>
   <filenames>
-  	ui-bg_flat_0_aaaaaa_40x100.png;
-	ui-bg_flat_75_ffffff_40x100.png;
-	ui-bg_glass_55_fbf9ee_1x400.png;
-	ui-bg_glass_65_ffffff_1x400.png;
-	ui-bg_glass_75_dadada_1x400.png;
-	ui-bg_glass_75_e6e6e6_1x400.png;
-	ui-bg_glass_95_fef1ec_1x400.png;
-	ui-bg_highlight-soft_75_cccccc_1x100.png;
-	ui-icons_2e83ff_256x240.png;
-	ui-icons_222222_256x240.png;
-	ui-icons_454545_256x240.png;
-	ui-icons_888888_256x240.png;
-	ui-icons_cd0a0a_256x240.png;
+	jquery-1.6.2.min.js;
+	jquery-ui-1.8.16.custom.min.js;
   </filenames>
 </fileglob>
 
 <fileglob>
   <glob>*.*</glob>
-  <sourcedir>loncom/html/adm/jQuery/css/ui-lightness/</sourcedir>
-  <targetdir dist='default'>home/httpd/html/adm/jQuery/css/ui-lightness/</targetdir>
+  <sourcedir>loncom/html/adm/jQuery/css/smoothness/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/jQuery/css/smoothness/</targetdir>
   <categoryname>interface file</categoryname>
   <description>
-jQuery custom distribution of version 1.3.2, UI version 1.7.2 -- stylesheets
+jQuery custom distribution of version 1.6.2, UI version 1.8.16 -- stylesheets
   </description>
   <filenames>
-	jquery-ui-1.7.2.custom.css;
+	jquery-ui-1.8.16.custom.css;
   </filenames>
 </fileglob>
 
 <fileglob>
   <glob>*.*</glob>
-  <sourcedir>loncom/html/adm/jQuery/css/ui-lightness/images/</sourcedir>
-  <targetdir dist='default'>home/httpd/html/adm/jQuery/css/ui-lightness/images/</targetdir>
+  <sourcedir>loncom/html/adm/jQuery/css/smoothness/images/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/jQuery/css/smoothness/images/</targetdir>
   <categoryname>interface file</categoryname>
   <description>
-jQuery custom distribution of version 1.3.2, UI version 1.7.2 -- stylesheets
+jQuery custom distribution of version 1.6.2, UI version 1.8.16 -- images for css.
   </description>
   <filenames>
-	ui-bg_diagonals-thick_18_b81900_40x40.png;
-	ui-bg_diagonals-thick_20_666666_40x40.png;
-	ui-bg_flat_10_000000_40x100.png;
+  	ui-bg_flat_0_aaaaaa_40x100.png;
+	ui-bg_flat_75_ffffff_40x100.png;
+	ui-bg_glass_55_fbf9ee_1x400.png;
 	ui-bg_glass_65_ffffff_1x400.png;
-	ui-bg_glass_100_f6f6f6_1x400.png;
-	ui-bg_glass_100_fdf5ce_1x400.png;
-	ui-bg_gloss-wave_35_f6a828_500x100.png;
-	ui-bg_highlight-soft_75_ffe45c_1x100.png;
-	ui-bg_highlight-soft_100_eeeeee_1x100.png;
-	ui-icons_228ef1_256x240.png;
+	ui-bg_glass_75_dadada_1x400.png;
+	ui-bg_glass_75_e6e6e6_1x400.png;
+	ui-bg_glass_95_fef1ec_1x400.png;
+	ui-bg_highlight-soft_75_cccccc_1x100.png;
+	ui-icons_2e83ff_256x240.png;
 	ui-icons_222222_256x240.png;
-	ui-icons_ef8c08_256x240.png;
-	ui-icons_ffd27a_256x240.png;
-	ui-icons_ffffff_256x240.png;
+	ui-icons_454545_256x240.png;
+	ui-icons_888888_256x240.png;
+	ui-icons_cd0a0a_256x240.png;
   </filenames>
 </fileglob>
 
@@ -4676,6 +5011,15 @@ Handles a searchable catalogue.
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/lonsearchcourse.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonsearchcourse.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Handles a searches inside courses/communities.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/interface/lonmysql.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonmysql.pm</target>
 <categoryname>handler</categoryname>
@@ -4907,15 +5251,6 @@ echo 'pod2html lonparmset.pm'
 </dependencies>
 </file>
 <file>
-<source>loncom/publisher/lonconstruct.pm</source>
-<target dist='default'>home/httpd/lib/perl/Apache/lonconstruct.pm</target>
-<categoryname>handler</categoryname>
-<description>
-Page wrapper for handling construction space.
-</description>
-<status>works/unverified</status>
-</file>
-<file>
 <source>loncom/publisher/lonpublisher.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonpublisher.pm</target>
 <categoryname>handler</categoryname>
@@ -4961,7 +5296,7 @@ echo 'pod2html lonpublisher.pm'
 <target dist='default'>home/httpd/lib/perl/Apache/lonmenu.pm</target>
 <categoryname>handler</categoryname>
 <description>
-Has routines which control the remote control.
+Has routines which control the inline menu.
 </description>
 <status>works/unverified</status>
 </file>
@@ -5054,16 +5389,6 @@ This will take annotations and then plug
 <status>works/unverified</status>
 </file>
 <file>
-<source>loncom/html/res/adm/pages/bookmarkmenu/admbookmarks.pm</source>
-<target dist='default'>home/httpd/lib/perl/Apache/admbookmarks.pm</target>
-<categoryname>handler</categoryname>
-<description>
-This will take bookmarks and get/write/display them for the LON-CAPA user
-interface.
-</description>
-<status>works/unverified</status>
-</file>
-<file>
 <source>rat/lonratsrv.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonratsrv.pm</target>
 <categoryname>handler</categoryname>
@@ -5213,7 +5538,7 @@ Tags Default Definition Module
 <description>
 Table object
 </description>
-<status>works/unverified</status>
+<status>works</status>
 </file>
 <file>
 <source>loncom/xml/lonlatextable.pm</source>
@@ -5476,6 +5801,13 @@ access handler for user uploaded files
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/auth/lonwebdavacc.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonwebdavacc.pm</target>
+<categoryname>handler</categoryname>
+<description>authorization for webDAV access to Author Spaces</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/lontrans.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lontrans.pm</target>
 <categoryname>handler</categoryname>
@@ -5640,6 +5972,13 @@ by the URL-related pattern syntax:
   <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/auth/lonwebdavauth.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonwebdavauth.pm</target>
+<categoryname>handler</categoryname>
+<description>authenticate, set up session environment for webDAV</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/auth/lonlogout.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonlogout.pm</target>
 <categoryname>handler</categoryname>
@@ -5675,6 +6014,41 @@ by the URL-related pattern syntax:
   <status>works/unverified</status>
 </file>
 <file>
+  <source>loncom/auth/lonshibauth.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonshibauth.pm</target>
+  <categoryname>handler</categoryname>
+  <description>Redirect Shibboleth authentication to Single Sign On 
+               i.e., to: /adm/sso
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/auth/lonshibacc.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonshibacc.pm</target>
+  <categoryname>handler</categoryname>
+  <description>Authorization handler used to remove trailing @internet dom 
+               from Shibboleth authenticated username (e.g., @mit.edu).
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/auth/lonnoshib.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonnoshib.pm</target>
+  <categoryname>handler</categoryname>
+  <description>Content handler for /adm/sso when Shibboleth auth is inactive.
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/html/adm/sso</source>
+  <target dist='default'>home/httpd/html/adm/sso</target>
+  <categoryname>interface file</categoryname>
+  <description>HTML page to redirect browser request for /adm/sso to
+  /adm/roles when Shibboleth SSO not in use (i.e., mod_shib not loaded).
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
 <source>loncom/lonnet/perl/lonrep.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonrep.pm</target>
 <categoryname>handler</categoryname>
@@ -5864,7 +6238,7 @@ Domain information serving.
 <file>
 <source>loncom/mime.types</source>
 <target dist='default'>etc/httpd/conf/mime.types</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/mime.types</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/mime.types</target>
 <categoryname>www static conf</categoryname>
 <description>Expanded mime.types</description>
 </file>
@@ -5893,6 +6267,15 @@ which is restricted based on file or ser
 </description>
 </file>
 <file>
+<source>loncom/html/adm/nowebdav.html</source>
+<target dist='default'>home/httpd/html/adm/nowebdav.html</target>
+<categoryname>interface file</categoryname>
+<description>
+static html page that is shown when an attempt is made to access 
+an inaccessible path using webDAV.
+</description>
+</file>
+<file>
 <source>loncom/html/adm/help/searchcat.html</source>
 <target dist='default'>home/httpd/html/adm/help/searchcat.html</target>
 <categoryname>interface file</categoryname>
@@ -6517,6 +6900,8 @@ compiles/tth.so.i386.perl.5.10;
 compiles/tth.so.x86_64.perl.5.10;
 compiles/tth.so.i386.perl.5.12;
 compiles/tth.so.x86_64.perl.5.12;
+compiles/tth.so.i386.perl.5.14;
+compiles/tth.so.x86_64.perl.5.14;
 compiles/tth.so.i386.debian5;
 compiles/tth.so.x86_64.debian5
 </dependencies>
@@ -6926,12 +7311,12 @@ w.gif;
 x.gif;
 y.gif;
 z.gif;
-ö.gif;
+ö.gif;
+ä.gif;
+ü.gif;
 ä.gif;
+ö.gif;
 ü.gif;
-ä.gif;
-ö.gif;
-ü.gif;
 colon.gif;
 hyphen.gif;
 slash.gif;
@@ -6969,7 +7354,6 @@ pref_pt.gif;
 prt_pt.gif;
 res_pt.gif;
 roles_pt.gif;
-sbkm_pt.gif;
 spacer_pt.gif;
 sprs_pt.gif;
 src_pt.gif;
@@ -6984,6 +7368,7 @@ vbkm_pt.gif;
 <categoryname>graphic file</categoryname>
 <description>icons used for the entire LON-CAPA user interface</description>
 <filenames>
+alnk.gif;
 anno.gif;
 anot.gif;
 anot2.gif;
@@ -7008,7 +7393,9 @@ crsconf.gif;
 cstr.gif;
 del.gif;
 dempty.gif;
+dempty.gif;
 docs.gif;
+edittoplevel.gif;
 egrd.gif;
 empty.gif;
 enrl.gif;
@@ -7031,7 +7418,6 @@ list.gif;
 logout.gif;
 mail.gif;
 mark-discussionentries-read.gif;
-mcrs.gif;
 mrk.gif;
 nav.gif;
 new.gif;
@@ -7050,16 +7436,17 @@ prt.gif;
 pub.gif;
 qempty.gif;
 rcrs.gif;
+refresh.gif;
 reload.gif;
 remotebg.gif;
 res.gif;
 roles.gif;
 rsrv.gif;
 rtrv.gif;
-sbkm.gif;
 sctr.gif;
 show-all.gif;
 show-incomplete-problems.gif;
+slnk.gif;
 spacer.gif;
 sprs.gif;
 src.gif;
@@ -7068,7 +7455,6 @@ start-navigation.gif;
 stat.gif;
 subm.gif;
 title.gif;
-vbkm.gif;
 </filenames>
 </fileglob>
 <fileglob>
@@ -7087,6 +7473,7 @@ conf.png;
 courses.png;
 crsconf.png;
 docs.png;
+editmap.png;
 eval.png;
 grds.png;
 grps.png;
@@ -7096,7 +7483,6 @@ pgrd.png;
 pref.png;
 roles.png;
 sprs.png;
-vbkm.png;
 anot.png;
 anot2.png;
 blog.png;
@@ -7113,10 +7499,16 @@ port.png;
 prt.png;
 rcrs.png;
 rsrv.png;
-sbkm.png;
+slnk.png;
 src.png;
 srvr.png;
 subm.png;
+thumbsup.png;
+thumbsup_gray.png;
+thumbsup_novote.png;
+thumbsdown.png;
+thumbsdown_gray.png;
+thumbsdown_novote.png;
 back.png;
 catalog.png;
 com.png;
@@ -7138,10 +7530,12 @@ dismath.png;
 feedback.png;
 mngcu.png;
 prob_ana.png;
+process-stop.png;
 role_hotlist.png;
 self_enroll.png;
 survey_rep.png;
 subdocs.png;
+tolastloc.png;
 uplusr.png;
 </filenames>
 </fileglob>
@@ -7152,6 +7546,7 @@ uplusr.png;
 <categoryname>graphic file</categoryname>
 <description>graphical icons used in submenus</description>
 <filenames>
+alnk.png;
 aboutme.png;
 addClickerInfoFile.png;
 anonsurveythreshold.png;
@@ -7169,14 +7564,18 @@ dump.png;
 edit-copy.png;
 edit-find-replace.png;
 edit-find.png;
+edit-mode-22x22.png;
 edit-redo.png;
+edit-redo-22x22.png;
 edit-select-all.png;
 edit-undo.png;
+edit-undo-22x22.png;
 emblem-photos.png;
 emblem-readonly.png;
 emblem-system.png;
 extres.png;
 folder-new.png;
+folder-new-22x22.png;
 format-justify-fill.png;
 fromfile.png;
 groupportfolio.png;
@@ -7186,12 +7585,15 @@ grp_settings.png;
 grp_tools.png;
 ims.png;
 imsexport.png;
+link-new-22x22.png;
 list-add.png;
+list-add-22x22.png;
 log.png;
 mail-message-new.png;
 mail-reply-all.png;
 mail-reply-sender.png;
 messalog.png;
+move-22x22.png;
 myaboutme.png;
 navigation.png;
 network-workgroup.png;
@@ -7202,23 +7604,33 @@ preferences-desktop-remote-desktop.png;
 preferences-desktop-theme.png;
 preferences-desktop-wallpaper.png;
 preferences-system-windows.png;
+rcrs-22x22.png;
 recover.png;
 remotecontrol.png;
 resversion.png;
+role_hotlist-22x22.png;
+save-22x22.png;
 scoreupfrm.png;
 selfenrl-queue.png;
+selfenrl-queue-22x22.png;
 sequence.png;
 simple.png;
 simpprob.png;
 start-here.png;
+start-here-22x22.png;
 subtimpl.png;
 syllabus.png;
 symbs.png;
 system-lock-screen.png;
 system-users.png;
+timer.png;
 uplcrs.png;
 uploadscores.png;
 verify.png;
+view-mode-22x22.png;
+wishlist.png;
+wishlist-link.png;
+wishlist-link-lighter.png;
 </filenames>
 </fileglob>
 <file>
@@ -7355,56 +7767,6 @@ world2.gif
 </filenames>
 </fileglob>
 <fileglob>
-<glob>*.gif</glob>
-<sourcedir>loncom/html/res/adm/pages/bookmarkmenu/</sourcedir>
-<targetdir dist='default'>home/httpd/html/res/adm/pages/bookmarkmenu/
-</targetdir>
-<categoryname>graphic file</categoryname>
-<description>
-icons used for the bookmark portion of the LON-CAPA user interface
-</description>
-<filenames>
-folder_anim.gif;
-folder_close.gif;
-folder_drag.gif;
-folder_new.gif;
-folder_open.gif;
-folder_pointer_closed.gif;
-folder_pointer_opened.gif;
-folder_static.gif;
-folder_trash.gif;
-folder_trash_hover.gif;
-left_bar.gif;
-link.gif;
-link_anim.gif;
-link_drag.gif;
-ll_corner.gif;
-lower_bar.gif;
-lr_corner.gif;
-pix.gif;
-right_bar.gif;
-toolbar_bg.gif;
-ul_corner.gif;
-upper_bar.gif;
-ur_corner.gif
-</filenames>
-</fileglob>
-<fileglob>
-<glob>*.html</glob>
-<sourcedir>loncom/html/res/adm/pages/bookmarkmenu/</sourcedir>
-<targetdir dist='default'>home/httpd/html/res/adm/pages/bookmarkmenu/
-</targetdir>
-<categoryname>interface file</categoryname>
-<description>
-associated with the scheme of displaying bookmarks
-</description>
-<filenames>
-bookmarkmenu_toolbar.html;
-blank.html;
-closechildren.html
-</filenames>
-</fileglob>
-<fileglob>
 <glob>*.*</glob>
 <sourcedir>loncom/html/res/adm/pages/reactionresponse/</sourcedir>
 <targetdir dist='default'>home/httpd/html/res/adm/pages/reactionresponse/</targetdir>
@@ -7421,15 +7783,6 @@ reaction_window.html
 </filenames>
 </fileglob>
 <file>
-<source>loncom/html/res/adm/pages/bookmarkmenu/bookmarklib.js</source>
-<target dist='default'>
-home/httpd/html/res/adm/pages/bookmarkmenu/bookmarklib.js</target>
-<categoryname>interface file</categoryname>
-<description>
-javascript for handling client-side interactions with bookmark interface
-</description>
-</file>
-<file>
 <source dist='default'>loncom/build/CHECKRPMS</source>
 <target dist='default'>usr/local/loncapa/bin/CHECKRPMS</target>
 <categoryname>system script</categoryname>
@@ -7503,12 +7856,12 @@ preserve_local_loncapa_cron
   </dependencies>
 </file>
 <file>
-<source>loncom/cron/loncapa</source>
-<target dist='default'>home/httpd/lib/perl/loncapa_cron-std</target>
-<categoryname>handler</categoryname>
-<description>
-  Back-up of standard loncapa cron file (the actual file in use: /etc/cron.d/loncapa may contain local modifications).
-</description>
+  <source>loncom/cron/loncapa</source>
+  <target dist='default'>home/httpd/lib/perl/loncapa_cron-std</target>
+  <categoryname>handler</categoryname>
+  <description>
+    Back-up of standard loncapa cron file (the actual file in use: /etc/cron.d/loncapa may contain local modifications).
+  </description>
 </file>
 <file>
 <source>loncom/ntp/step-tickers</source>
@@ -7543,7 +7896,7 @@ file that allows setuid password privile
 <file>
 <source>loncom/init.d/loncontrol</source>
 <target dist='default'>etc/rc.d/init.d/loncontrol</target>
-<target dist='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/init.d/loncontrol</target>
+<target dist='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/init.d/loncontrol</target>
 <categoryname>root script</categoryname>
 <description>
 Controls the launching/halting of lonc, lond, and lonsql processes.
@@ -7551,7 +7904,7 @@ Controls the launching/halting of lonc,
 </file>
 <link>
 <linkto dist='default'>etc/rc.d/init.d/loncontrol</linkto>
-<linkto dist='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/init.d/loncontrol</linkto>
+<linkto dist='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/init.d/loncontrol</linkto>
 <target dist='default'>
 etc/rc.d/rc0.d/K05loncontrol;
 etc/rc.d/rc1.d/K05loncontrol;
@@ -7561,7 +7914,7 @@ etc/rc.d/rc4.d/S95loncontrol;
 etc/rc.d/rc5.d/S95loncontrol;
 etc/rc.d/rc6.d/K05loncontrol
 </target>
-<target='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4'>
+<target='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>
 etc/rc.d/rc0.d/K05loncontrol;
 etc/rc.d/rc1.d/K05loncontrol;
 etc/rc.d/rc2.d/K05loncontrol;
@@ -7569,7 +7922,7 @@ etc/rc.d/rc3.d/S95loncontrol;
 etc/rc.d/rc5.d/S95loncontrol;
 etc/rc.d/rc6.d/K05loncontrol
 </target>
-<target dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>
+<target dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>
 etc/rc0.d/K05loncontrol;
 etc/rc1.d/K05loncontrol;
 etc/rc2.d/S95loncontrol;
@@ -7584,13 +7937,13 @@ symbolic links to /etc/rc.d/init.d/lonco
 </description>
 </link>
 
-<file dist="suse9.2 suse9.3 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 sles9 sles10 sles11">
+<file dist="suse9.2 suse9.3 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 sles9 sles10 sles11">
   <source>loncom/init.d/loncontrol</source>
   <target>etc/rc.d/</target>
   <description>
     setup loncontrol to run at boot
   </description>
-  <installscript dist="suse9.2 suse9.3 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 sles9 sles10 sles11">
+  <installscript dist="suse9.2 suse9.3 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 sles9 sles10 sles11">
 -c 'chkconfig --del loncontrol;chkconfig loncontrol 35;chkconfig --list loncontrol'
   </installscript>
   <dependencies>
@@ -7815,6 +8168,15 @@ of users, and (b) to display e-mail of t
   </description>
 </file>
 <file>
+  <source>loncom/interface/lonblockingmenu.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonblockingmenu.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+   Handler for configuration of blocking of access to collaborative tools and/or
+resources for the duration of an exam.
+  </description>
+</file>
+<file>
   <source>loncom/interface/lonblockingstatus.pm</source>
   <target dist='default'>home/httpd/lib/perl/Apache/lonblockingstatus.pm</target>
   <categoryname>handler</categoryname>
@@ -7823,6 +8185,24 @@ of users, and (b) to display e-mail of t
   </description>
 </file>
 <file>
+<source>loncom/interface/lonwishlist.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonwishlist.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Utilities to modify the wishlist (add new links and folders,
+edit, move, sort or delete existing links and folders).
+Links from the wishlist can be imported into courses.</description>
+<status>works/unverified</status>
+</file>
+<file>
+<source>loncom/interface/lonwishlistdisplay.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonwishlistdisplay.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Module for displaying the wishlist.</description>
+<status>works/unverified</status>
+</file>
+<file>
   <source>loncom/automation/Autocreate.pl</source>Autocreate.pl
   <target dist='default'>home/httpd/perl/Autocreate.pl</target>
   <categoryname>script</categoryname>
@@ -7848,6 +8228,7 @@ excise_from_db.pl;
 getties.pl;
 login_count.pl;
 modify_config_files.pl;
+move_construction_spaces.pl;
 parse_scantron.pl;
 seed_accesscount.pl;
 stress.pl;
@@ -7908,7 +8289,7 @@ for probing operating system flavor and
 <categoryname>root script</categoryname>
 <description>
 Script to update cluster tables: dns_hosts.tab and dns_domain.tab
-on a LON-CAPA DNS server.
+on a LON-CAPA DNS server.  
 </description>
 <status>works/unverified</status>
 </file>